Bacillus arachidis: QRY57_14615
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Entry
QRY57_14615 CDS
T09337
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bard
Bacillus arachidis
Pathway
bard03420
Nucleotide excision repair
bard03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QRY57_14615 (helD)
03430 Mismatch repair
QRY57_14615 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bard03400
]
QRY57_14615 (helD)
Enzymes [BR:
bard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QRY57_14615 (helD)
DNA repair and recombination proteins [BR:
bard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QRY57_14615 (helD)
MMR (mismatch excision repair)
Other MMR factors
QRY57_14615 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PhoH
AAA_30
SLFN-g3_helicase
AAA_16
NACHT
DEAD
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WIY59145
LinkDB
All DBs
Position
complement(2536878..2539238)
Genome browser
AA seq
786 aa
AA seq
DB search
MEKTNQEWKQEQHRVKEVVGKIKNHIDTLERYTSAAMKDVVQIRKHFWDDVTVNVDNTEE
AIETAASIKQQAELLSEREQSHRHAYQKLKGLQRLQQSPYFGRIDFLEDGEKSEDAIYLG
IHSFYDENTEQFLVYDWRAPISSLYYDYSVGRAKYEAPNDVISGEMTLKRQYVIRNGQIV
SMFDTGVTIGDKLLQEVLGNNANTQMKSIVSTIQKEQNQIIRNEKSRLLVVQGAAGSGKT
SAALQRVAYLLYRYRDSLHADQIVLFSPNSMFNSYVSTVLPELGEDNMKQTTFQEYLERH
IDKKFELEDPFTQMEYALTRMEEKSYETRLEGIRYKASSDFIEVVDRYVSYLKREGMLFK
DIKFRGEVLISEEQIKERFYEFDSSIRIPNRIKLISEWLLKELKEQEKIERKKLWVEEEV
QLLDKETYAKVHQKLQQRQEYSQDAFDEFEREQNMLAAIVVKEHFKPLRRRVKKLQFIHT
PAIYIQIFKDPQFAKQLVEESKLPQRWNEICKETIEKIQDFYMSYEDATPYLYLKDQLEE
LQRNTSVQHIFIDEAQDYSAFQYAFLKRIFPHTKMTILGDFNQTIYEHASENEFSQLSTL
YGEELSERIVLTRSYRSTKQIIEFTRQLITDGHEIEPFQRDGKQPSITEVKEGKAHHKKI
VDQIEQLKQRGHKTIAVICKTAEESKEAYLALQTSLQVRLIKKETSSFDTGILIIPSYLS
KGVEFDAVIIYDASKKKYSRESERKLFYTACTRAMHELYIYSVGEMNTFLQSVSTDTYML
ENEKVQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacaaatcaagaatggaaacaggaacaacatcgtgtgaaagaagtagttgga
aagataaaaaatcatattgatacattagagcgatatacgagtgcagcaatgaaagatgtt
gtccagattcgaaaacatttttgggacgatgtaacagtgaatgttgataatacagaagag
gctattgaaacggcagcgagtattaaacaacaagcagagttattatccgaacgagagcaa
agtcatcgccatgcttatcaaaaactaaaaggactacaaagattacaacagtccccatac
tttggaaggatagatttcttagaagatggtgaaaaaagtgaagatgctatttatcttggt
attcactcattctacgatgaaaatacagaacaatttcttgtatacgattggcgagcccct
atatcaagtttgtattatgactattctgtaggaagagcaaaatacgaagcacctaatgat
gtgatttcgggtgaaatgacattaaaaagacaatatgttattcgaaatggccaaattgta
agtatgtttgatacaggtgttacgattggtgataaattactgcaagaagtattagggaat
aacgctaatacacaaatgaaaagcattgtttcaacaattcaaaaggaacaaaaccaaatt
atccggaatgaaaaaagtcgtttgcttgttgtgcaaggagctgcgggaagcggtaaaaca
tcggcagcgcttcagcgtgtcgcgtatttattatatcgatatcgggattctctacacgct
gatcaaatcgttcttttttctcccaactcgatgtttaatagttatgtttccacagtgcta
ccggaacttggtgaggacaatatgaaacaaacgacattccaagaatacttagagcgtcat
attgataagaagtttgaattggaagatccatttacacaaatggaatatgcattgacaaga
atggaagaaaagagttatgaaacacgattagaaggaattagatataaagcaagttctgat
tttattgaagtagtagatcggtatgtatcttacttaaaacgagaaggtatgttatttaaa
gatattaaatttagaggagaagtattaatctccgaagaacaaataaaagaacgattttat
gaatttgattcttcgatacggattccaaatcgaataaaattaatttctgaatggctacta
aaagagctgaaagaacaagaaaaaatagagagaaaaaaactttgggtggaagaagaagta
cagttattagataaggaaacgtatgcaaaagttcatcagaaattacagcaaaggcaagaa
tattcccaggatgcgtttgatgaatttgaacgagaacaaaatatgttggcggctatcgtt
gtgaaagaacattttaaaccactccgaagacgtgtgaaaaaattacaatttattcataca
ccagcaatttatatacaaatatttaaagatccgcagtttgctaagcaacttgtagaggaa
agtaaattaccgcaaagatggaatgaaatatgtaaagaaacaatagaaaaaatacaagat
ttttatatgtcatatgaagatgcaacaccttatttatatttaaaagatcaactggaagag
ttgcaaagaaatacatctgtgcagcacatatttattgatgaagcgcaggattattctgca
tttcaatatgcattcttaaaacgaatattccctcatacaaaaatgacaatactaggtgat
tttaatcagaccatttatgaacatgcatcagagaatgaattttcacagttaagtacgttg
tatggagaagagctgagtgaaagaatcgtacttacgcgtagttatcgctctacaaaacaa
atcattgaatttacaaggcagttaattacagatgggcatgaaattgaaccgtttcagcgt
gacggtaaacaaccaagtataacggaagtgaaagaaggaaaagcgcatcataaaaagatt
gtggatcaaatcgagcagttgaagcaaagaggtcataagacaattgcggttatttgtaaa
acagctgaggaaagtaaagaagcttatcttgcacttcaaacatcattacaagttcgtctc
attaagaaagaaacgagttcgtttgatacaggtattttgattatcccatcgtatttatcg
aaaggggtagagtttgatgcggttatcatctatgatgcatcaaagaaaaaatatagccga
gaaagtgaacggaaattattttatactgcttgtacacgtgcaatgcatgagttatatatt
tattctgtaggggaaatgaatacgttcttgcagtcggtatccacagatacgtatatgtta
gaaaatgaaaaggttcaataa
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