Bradyrhizobium arachidis: WN72_00275
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Entry
WN72_00275 CDS
T06898
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
barh
Bradyrhizobium arachidis
Pathway
barh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
barh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WN72_00275 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barh03019
]
WN72_00275 (pnp)
03016 Transfer RNA biogenesis [BR:
barh03016
]
WN72_00275 (pnp)
Enzymes [BR:
barh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WN72_00275 (pnp)
Messenger RNA biogenesis [BR:
barh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WN72_00275 (pnp)
Transfer RNA biogenesis [BR:
barh03016
]
Prokaryotic type
tRNA degradation factors
WN72_00275 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QOZ65051
UniProt:
A0AAE7TEW4
LinkDB
All DBs
Position
61886..64048
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AA seq
720 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVIATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVAMVAASAALTLSGAPFKGPIGAARVGFANDEFVLNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIDLAEKAAKEPREVTVIDNSA
LEKEMLGLIEQELRAAYAIPVKQDRYAAVGVAKEKVMAHYFPEGQEPKYDKLRVAGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNIVAEVGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIEGITEEIMRVALGQAKEGRIHILGEMAK
ALTAARAELGEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASEPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLASARV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKDKAAEGEKAPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcagtcgagatcgactggggcggacgccctctcaagctggaaacc
ggcaagatcgcgcgccaggccgacggcgccgtcatcgccacctatggcgagaccgtggtg
ctcgccaccgtcgttgcggcgaaggcgccgcgcgagggcgtcgacttcctgccgctgacc
gtcgactaccaggagaaaacctacgccgcgggccgcattcccggcggctatttcaagcgc
gagggccgtccgaccgagaaggagaccctggtctcccgcctgatcgaccgtccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgtcaccgtgctctcgcac
gacatggaaaacgatcccgatatcgtcgcgatggtcgcagcctccgctgcgctgacgctg
tccggcgcgcccttcaagggcccgatcggcgccgcccgcgtcggctttgccaatgacgaa
ttcgtgctcaacccgacgctcgacgagatggtcgacacccagctcgacctcgtcgtcgcc
ggcaccgccgacgccgtgctgatggtggaatcggaagccaaggagctcaacgaagacgtg
atgctcggcgccgtgatgttcggtcaccgccacttccagccggtgatcaacgcgatcatc
gatctcgccgagaaggccgccaaggagccgcgcgaagtcaccgtcatcgacaattcggcg
ctcgagaaggaaatgctcggcctgatcgagcaggagctgcgcgccgcctacgcgatcccg
gtgaagcaggatcgctatgccgcggtcggcgtcgccaaggaaaaggtgatggcccactac
ttcccggaaggacaggagccgaaatacgacaagctccgcgtcgccggcgtgttcaaggag
ctggaagccaagatcgtccgctggaacatcctcgacaccggcaagcgcatcgacggccgc
gattccaagaccgtgcgcaacatcgtcgccgaagtcggcgtgctgccccgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgatggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctgtcggggacgtacaaggaaacgttcctgctgcac
tacaacttcccgccctactcggtcggtgagaccggccgcctcggcggcaccaagcgccgc
gagatcggccacggcaagctggcctggcgcgcgatccatccggtgctgccgccgcaccac
gaattcccctacaccacgcgcgtggtgtcggagatcaccgaatccaacggctcctcgtcg
atggcttcggtctgcggcgcctcgctcgcgctgatggacgccggtgtgcccttgaagcgg
ccgaccgcgggcatcgcgatgggcctgatcctcgaagacaagcgctttgcggttctctcg
gacatcctcggtgacgaggaccatctcggcgacatggacttcaaggtcgccggcaccgag
cagggcatcacctcgctccagatggacatcaagatcgaaggcatcaccgaggagatcatg
cgcgtcgccctcggccaggccaaggaaggccgcatccacatcctcggcgagatggccaag
gccctgaccgctgcgcgcgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
agcgacggcgaggcgatgaaggctgcgatcaagtggatcaagtcgatcgcgtccgagccg
gaagtcggccagatctatgacggcaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggctccaaggacggtctcgtccacatcagccagctcgcttcggcgcgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacccgcctgtcgatgaaggtggtcgaccagaccaccggcgaggac
ctcgaggccaaggacaaggccgccgagggcgagaaggccccgcgcgaagccgccggcgag
taa
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