KEGG   Bradyrhizobium arachidis: WN72_01070
Entry
WN72_01070        CDS       T06898                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
barh  Bradyrhizobium arachidis
Pathway
barh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:barh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WN72_01070 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:barh03021]
    WN72_01070 (rho)
   03019 Messenger RNA biogenesis [BR:barh03019]
    WN72_01070 (rho)
Transcription machinery [BR:barh03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     WN72_01070 (rho)
Messenger RNA biogenesis [BR:barh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     WN72_01070 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 AAA_22 NACHT S1CSD-TOTE-2 AAA Fungal_virus_P2_C Spore_III_AA
Other DBs
NCBI-ProteinID: QOZ65195
UniProt: A0AAE7NJ00
LinkDB
Position
222198..223463
AA seq 421 aa
MREIKLQDLKSKTPAELVSFAEENGVENASTMRKQELLFAILKQLSLAETDIVGEGVVEV
LSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVN
TLNFEDPEKAKHKVNFDNLTPLFPNQRFRMEIDDPTRKDLSARVIDIVAPIGKGQRALIV
APPRTGKTVLMQNIAHSITHNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVSDKRTFPA
IDISRSGTRKEELITDPQVLKKMYVLRRILNPMGTMDAIDFLLDKLRSTKSNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaaattaaactccaggacctcaagtcgaagacgccggccgagctcgtctcgttc
gcggaagagaatggggtcgagaacgccagcaccatgcgcaagcaggagctgctcttcgcc
atcctcaagcagctttcgctcgccgagaccgatatcgtcggcgaaggcgtcgtcgaggtt
ctttccgacggcttcggcttcctccgttcgcccgacgcgaattatctgccgggccctgac
gacatctacgtttcgccctcgcagatccgccgtttcggcctgcgcacgggtgacaccatc
gaaggccacatccgcagcccgaaagagggcgagcgttacttcgcgttgctgaaggtcaac
acgctcaatttcgaggacccggaaaaggccaagcacaaggtcaatttcgataatctcacc
ccgctgtttccgaatcagcgtttccgcatggagatcgacgatccgacgcggaaagacctg
tctgcacgtgtgatcgacatcgtggccccaatcggcaagggccagcgcgcactgatcgtg
gcgccgccgcgcaccggtaaaaccgtgctgatgcagaacatcgcgcactcgatcacgcac
aatcatcccgaatgctatctgatcgtgctcttgatcgacgagcgtccggaagaagtcacg
gacatgcagcgttcggtgaagggcgaggtcgtgtcgtcgaccttcgacgagccggcggtg
cgtcacgtccaggtcgccgagatggtgatcgagaaagcaaagcgcctggtcgagcatggc
cgcgacgtcgtgatcctgctcgattcgatcacgcgcctcggccgtgcctacaacaccgtg
gtgccgtcatccggcaaggtgctgaccggcggcgtcgacgccaacgcgctgcagcgtccg
aagcgcttcttcggtgccgcccgcaacatcgaggagggcggctcgctgaccatcattgcg
accgcgctggtcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggtaactcggaactgatcctggaccgcaaggtctcggacaagcgcaccttcccggcg
atcgacatctcgcgctccggcacccgcaaggaggagctcatcaccgatccgcaggtgctc
aagaagatgtacgtcctccgccgcatcctcaatccgatgggcacgatggacgcgatcgac
ttcctgctcgacaagctgcgctcaaccaagagcaattcggagttcttcgactccatgaat
acctga

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