Bradyrhizobium arachidis: WN72_38120
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Entry
WN72_38120 CDS
T06898
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
barh
Bradyrhizobium arachidis
Pathway
barh00730
Thiamine metabolism
barh01100
Metabolic pathways
barh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
barh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
WN72_38120
Enzymes [BR:
barh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
WN72_38120
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QOZ71464
UniProt:
A0AAE7NZ05
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All DBs
Position
7937845..7939743
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AA seq
632 aa
AA seq
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MNIRSNPDKTVPAVTTGPLPSSRKIFASPDAAPDIRVPLREIILSEGAGEPNLPVYDTSG
PYTDPSVTIDVNAGLARSRKQWVLERGGVEEYEGRQIKPEDNGSVSTDKAARAFSAYHKP
LRGLDGHKITQLEFARAGIVTKEMIYVAARENLGRKQQLERAEAALADGESFGAAVPAFI
TPEFVRDEIARGRAIIPSNINHSELEPMIIGRNFLTKINANIGNSAVTSSVEEEVEKMVW
AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCNGDPVALTWELYKDT
LIEQCEQGVDYFTIHAGVRLQYIHLTANRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDE
ICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWDKGCQVMIEGPGHV
PMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWTDQFNLGLD
PDTAKSFHDETLPKEAHKVAHFCSMCGPKFCSMKITQDVRDYAATLNDPNSVGMSMQGTA
EDGMAKMSAKFKEMGSSVYLDAEKVKESNRVL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccgctccaatcccgacaagaccgtccccgccgtcaccaccggcccccttccc
tcctcgcgcaagatcttcgcctcgccggatgcggcaccggacatccgcgtgcccttgcgc
gagatcatcctctccgaaggcgcgggcgagccgaacctgccggtctacgacacctcgggc
ccctacaccgatccgtccgtcaccatcgacgtcaacgccggccttgcccgcagccgcaag
caatgggtgctggagcggggcggcgtcgaggaatatgagggccggcagatcaagccggag
gacaatggcagcgtctccaccgacaaggccgcgcgcgccttctcggcctatcacaagccg
ctgcgcggcctcgacggccacaagatcacgcagctcgaattcgcccgcgccggcatcgtc
accaaggagatgatctacgtcgcggcgcgcgaaaacctcggtcgcaagcagcagctcgag
cgcgcggaggcggcgcttgccgacggcgaaagcttcggcgccgcggtgcccgccttcatc
acgccggagttcgtgcgcgacgagatcgcgcgcggccgtgccattatcccctccaacatc
aaccacagcgaactcgagccgatgatcatcggccgcaacttcctgaccaagatcaacgcc
aatatcggcaactcagcggtgacctcgtcggtcgaggaagaggtcgagaagatggtgtgg
gcgatccgctggggcgccgacaccgtgatggacctctcgacgggtcgcaacatccacacc
acgcgcgaatggattttgcgcaactcgccggtgccgattggcaccgtgccgatctatcag
gcgctggagaagtgcaacggcgatcccgtcgcgctgacctgggagctctacaaggacacg
ctgatcgagcagtgcgagcagggcgtcgactatttcaccatccacgccggcgtacgcctg
caatacatccacctcaccgctaaccgcgtcaccggcatcgtcagccgtggcggctcgatc
atggcgaagtggtgcctcgcgcatcacaaggagagttttctttacacccacttcgacgaa
atttgcgacttgatgcgcaaatacgatgtctccttctcgttgggtgatggcctgcgtcca
ggctcgatcgccgacgcgaacgaccgcgcgcagtttgccgaactcgaaacgctcggcgaa
ctgacaaaaatcgcgtgggacaagggctgccaggtcatgatcgagggccccggccacgtg
ccgatgcacaagatcaagatcaacatggacaagcagctcaaggagtgcggcgaagcgccg
ttctacacgcttggaccgctgaccaccgacatcgcgccgggctatgaccacatcacctca
ggcatcggcgccgccatgatcggctggttcggctgcgccatgctctgctacgtcacaccg
aaggagcatctcggcctgcctgatcgtaacgacgtcaagaccggcgtcatcacctacaag
atcgccgctcacgccgccgatctcgccaagggccacccggcagcccagctgcgcgacgac
gccctctcccgtgcgaggttcgaattccgctggaccgaccagttcaacctcggcctcgac
ccggacaccgccaagagcttccacgacgagaccctgccgaaggaagcccacaaggtcgcc
catttctgctcgatgtgcggcccaaaattctgctcgatgaagatcacgcaggacgtgcgg
gactacgcggcgaccctgaacgatccgaactcggtgggcatgtcgatgcagggcacggcc
gaggacggcatggcgaagatgagcgcgaagttcaaggagatggggagtagcgtttatctg
gatgcggagaaggtgaaggagagtaatcgggtgttgtga
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