Bradyrhizobium arachidis: WN72_41800
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Entry
WN72_41800 CDS
T06898
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
barh
Bradyrhizobium arachidis
Pathway
barh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
barh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WN72_41800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
barh03021
]
WN72_41800
Transcription machinery [BR:
barh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WN72_41800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
QOZ72099
UniProt:
A0AAE7TL74
LinkDB
All DBs
Position
complement(8693434..8695575)
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AA seq
713 aa
AA seq
DB search
MATKAKTLQAKDKEKDDKAADAPEKDSQDAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQL
NEVLPSDQTSPEQIEDIMSMLSDMGINVTEADDSEGEEEKDEGDDETDNELVEVTQKAVT
EVKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQA
IIIWRDELNEGKIFLRDIIDLEATYAGPDAKGGMNTAMIGAPTGENGEAPAEGGEAVAAT
AAAPAHVAPPAAPPSPTPFRAAPAAGEEGGEEKDPGEAAAEADMDDDEFENQMSLAAIEA
ELKPKVVEIFDKIADSYKKLRKLQEQDIQNQLQNESLSPHQERKYKKLKDEIIVEVKSLR
LNQARIDSLVEQLYDINKRLVSHEGRLMRLADSHGVARDDFLRNYTGSELDPRWLNRVSK
LSAKGWKNFVHHEKDRIKDLRHEVHQLAALTGLEIVEFRKIVHSVQKGEREARQAKKEMV
EANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
RSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLKI
AKEPLSLETPVGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERVLR
MRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggcaaagacgctgcaggcgaaggacaaggaaaaagacgacaaggcagcg
gatgctcccgagaaggattcccaggacgcgccctcgccgttgctcgatctgtctgacgcg
gcagtgaaaaagatgatcaagcaggccaagaagcgcggcttcgtgaccttcgatcagctc
aatgaagttttgccgtccgaccagacctcgcccgagcagatcgaggacatcatgtccatg
ctctcggacatgggcatcaacgtcaccgaagccgacgacagcgagggcgaagaagagaag
gacgagggtgacgacgagaccgataacgagctcgtcgaggtcacccagaaggccgtcacc
gaggtcaagaagagcgagccgggcgagcgcaccgacgatccggtgcgcatgtatctgcgc
gagatgggcacggtcgagctgctctcccgcgaaggcgaaatcgcgatcgccaagcgcatc
gaggccggccgcgaggcgatgatcgcgggtctgtgcgaaagcccgctgaccttccaggcc
atcatcatctggcgcgacgagctcaacgagggcaagatcttcctccgcgacatcatcgat
ctcgaagcgacctatgccggccccgacgccaagggcggcatgaacaccgcgatgatcggc
gcccccaccggcgagaacggcgaagcgccggctgaaggcggcgaggctgtcgccgccacc
gctgctgcgcccgcgcatgtcgccccgcccgcggcgcccccgtcgccgaccccgttccgc
gccgcgcccgccgccggtgaagaaggcggcgaggagaaggatccgggcgaggccgcggcc
gaagccgacatggacgacgacgagttcgagaaccagatgtcgcttgccgccatcgaggcg
gagctcaagccgaaggtcgtcgagatcttcgacaagatcgccgacagctacaagaagctg
cgtaagcttcaggagcaggacatccagaaccagctccagaacgagtcgctctcgccgcat
caggagcgcaagtacaagaagctgaaggacgagatcatcgtcgaggtgaagtcgctgcgc
ctcaatcaggcccgcatcgacagtctcgtcgagcagctctacgacatcaacaagcgcctc
gtctcgcatgagggccgcctgatgcgcctcgccgatagccatggcgtcgcgcgcgacgac
ttcctgcgcaactacaccggctcggagctcgatccgcgctggctcaaccgtgtctcgaag
ctttcggccaagggctggaagaactttgtccaccacgagaaggaccgcatcaaggatctc
cgtcacgaggtgcatcagctcgccgcgctgaccggcctcgagatcgtcgagttccgcaag
atcgtgcactccgtgcagaagggcgagcgcgaagcacgccaggccaagaaggagatggtg
gaagccaacctccgtctcgtgatctcgatcgccaagaagtacaccaaccgcggcctgcag
ttcctcgacctgatccaggaaggcaacatcggcctgatgaaggccgttgataagttcgag
taccgccgcggctacaagttctcgacctacgccacgtggtggattcggcaggcgatcact
cgctcgatcgccgaccaggcgcgcaccatccgcatccccgtgcacatgatcgagacgatc
aacaagatcgtgcgcacgtcgcgccagatgctcaacgagatcggccgcgagccgaccccg
gaagagctcgccgagaagctcggcatgcccttggagaaggtccgcaaggtcctcaagatc
gccaaggagccgctctcgctggagacgcccgtcggtgacgaagaggattcacatctcggc
gatttcatcgaggacaagaacgcgatcctgccgatcgacgccgcgatccagtcgaacttg
cgcgagaccaccacgcgcgtgctcgcctcgctcaccccgcgcgaagagcgtgtgctccgc
atgcgcttcggcatcggcatgaacaccgaccacacgctggaagaagtcggccagcagttc
tcggtgacgcgcgagcgtattcgtcagatcgaagcgaaggcgctgcgcaagctgaagcat
ccgtcgcggtcaaggaagctgcggtcgttcctggataactaa
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