Burkholderia arboris: NLX30_03930
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Entry
NLX30_03930 CDS
T08608
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bari
Burkholderia arboris
Pathway
bari00260
Glycine, serine and threonine metabolism
bari00460
Cyanoamino acid metabolism
bari00630
Glyoxylate and dicarboxylate metabolism
bari00670
One carbon pool by folate
bari00680
Methane metabolism
bari01100
Metabolic pathways
bari01110
Biosynthesis of secondary metabolites
bari01120
Microbial metabolism in diverse environments
bari01200
Carbon metabolism
bari01230
Biosynthesis of amino acids
bari01240
Biosynthesis of cofactors
bari04981
Folate transport and metabolism
Module
bari_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NLX30_03930
09102 Energy metabolism
00680 Methane metabolism
NLX30_03930
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NLX30_03930
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NLX30_03930
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NLX30_03930
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NLX30_03930
Enzymes [BR:
bari01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NLX30_03930
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
UTV55540
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Position
834044..835291
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AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPEIFAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEQMAQEHKPKLIVAGASAFSL
KIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKSYQEKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGPAEAEQVGNLIADVLDNPEDAATIERVRAQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgcgaacgtcgatcccgaaatctttgcagcgatc
gagcaggaaaaccgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacg
agcccggccgtgatggccgcacagggctcgcagctcacgaacaagtacgcggaagggtat
ccgggcaagcgctactacggcggctgcgagtacgtcgacgtcgtcgagcagctggcgatc
gaccgcgtgaagcagctgttcggcgcggaagcggcgaacgtgcagccgaactcgggttcg
caggcgaaccagggcgtgttcttcgcgatgctgaagccgggcgacacgatcatggggatg
agcctcgcacacggtggtcacctgacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgagaacgaagacatcgattacgacgccgccgag
cagatggcgcaggaacacaagccgaagctgatcgttgcgggcgcgtcggcgttctcgctg
aagatcgatttcgagcgtctggcgaagatcgcgaagtcggtgggcgcgtacctgatggtg
gacatggcccactacgcgggcctgatcgcagcgggcgtgtacccgaacccggtgccgcac
gcggacttcgtgacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggcggagtacgagaagccgatcaactcggcgatcttcccggggatccagggc
ggcccgctgatgcacgtgatcgcggcgaaggcggtggcgttcaaggaagcgctgtcgccg
gagttcaagtcgtaccaggagaaggtggtcgagaacgcacgcgtgctggctgaaacgctg
gtgaagcgcggtctgcggatcgtgtcgggccgtacggaaagccacgtgatgctggtggac
ctgcgtgcaaagcacatcacgggcaaggcagcggaagcggcgctgggcgcggcgcacatc
acggtgaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cgcctcggttcgccggcgatgacgacgcgtggcttcggcccggcggaagcggaacaggtg
ggtaacctgatcgccgacgtgctggacaacccggaagatgcagcgacgatcgagcgcgtg
cgcgcacaggtcgccgagctgaccaagcgtttcccggtctatcgctga
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