Burkholderia arboris: NLX30_04990
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Entry
NLX30_04990 CDS
T08608
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bari
Burkholderia arboris
Pathway
bari03030
DNA replication
bari03430
Mismatch repair
bari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLX30_04990
03430 Mismatch repair
NLX30_04990
03440 Homologous recombination
NLX30_04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bari03032
]
NLX30_04990
03400 DNA repair and recombination proteins [BR:
bari03400
]
NLX30_04990
Enzymes [BR:
bari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLX30_04990
DNA replication proteins [BR:
bari03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLX30_04990
DNA repair and recombination proteins [BR:
bari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLX30_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UTV55741
LinkDB
All DBs
Position
1:1047152..1048279
Genome browser
AA seq
375 aa
AA seq
DB search
MSDSRPSDPASEQPLVFVDLETTGGSSAEHRITEIGVVEIGPLGVSTWTSLVNPGQAIPP
FIQQLTGISDAMVRDAPTFASLAPALFERLDGKLFVAHNASFDRGFLRTEFERAGFAFNP
DVLCTVRLSRALFPRESRHGLDALIERHGLVPAARHRALADADLLWQFWRQLHDIVPLER
LRDQIALTTRHFRLGGELTEAWLDTAPAGCGAYALFGEGDAALYVGRSVRVRQRLRALLT
GERRSSKEMRLAQQVRRVEWRETGNELGAMLAEAQWIAQLRPSYNRRPAADAARAGGAPW
PFEGAVAFEAHGERHLFHVIDGWRYLGAAESLDAAARLVADGAAGAFEPFTHRLLQTHLA
RGLQVIPLTALTPAD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcccgtccgtccgatcccgcgagcgaacagccgctcgttttcgtcgacctt
gaaaccaccggcggctcgtccgccgaacatcgcatcaccgaaatcggcgtcgtcgaaatc
gggccgctcggcgtgtcgacgtggaccagcctcgtcaatccggggcaggcgattccgccg
ttcatccagcaactgacgggcatatcggatgcgatggtgcgcgacgcaccgacgttcgcg
tcactcgcgccggcgctgttcgagcggctcgacggcaagctgttcgtcgcacacaacgcg
agtttcgaccgcggtttcctgcgcaccgaattcgagcgcgcgggcttcgcgttcaatccc
gatgtgctgtgtacggtgcggctgtcgcgcgcgttgtttccgcgcgaatcgcggcacggg
ctcgatgcgttgatagaacggcatgggctcgttccggccgcgcgccaccgggcactggcg
gacgccgacctgctctggcagttctggcgtcaactgcacgacatcgtgccgctcgagcgg
ctgcgcgaccagattgcgttgacgacgcggcacttccgcctgggcggggagctgaccgaa
gcctggctcgataccgcgccggcgggatgcggcgcgtacgcgctgttcggagaaggggat
gctgcgctgtatgtcggccgcagcgtgcgcgtgcggcagcggctgcgcgcgctgctgacc
ggcgagcgccgctcgtcgaaggaaatgcggctggcgcagcaggtgcggcgcgtcgaatgg
cgcgagaccggcaacgagctgggggcgatgctcgccgaagcgcaatggattgcccaactg
cgcccgtcgtacaaccggcgcccggcggccgatgccgcccgcgcgggcggcgcgccctgg
ccgttcgaaggcgctgtcgcgttcgaggcgcacggcgagcgccatctgtttcatgtgatc
gacggctggcgttatctcggcgcggcggaatcgctcgatgcggccgcgcggctcgtggcc
gacggagcagccggcgcgttcgaaccctttacccaccgtctgctgcagacgcatctcgcg
cgtggtctgcaagtgattccgctcacggcgctcacgccggcggattga
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