Burkholderia arboris: NLX30_06185
Help
Entry
NLX30_06185 CDS
T08608
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bari
Burkholderia arboris
Pathway
bari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NLX30_06185 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bari03400
]
NLX30_06185 (recB)
Enzymes [BR:
bari01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NLX30_06185 (recB)
DNA repair and recombination proteins [BR:
bari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLX30_06185 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
DUF374
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UTV55965
LinkDB
All DBs
Position
1290691..1294401
Genome browser
AA seq
1236 aa
AA seq
DB search
MSAVSQPQQALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVVT
FTKAATAELHERIRSRLAQLAHALDTGDDGGDPFIARLLETTLGDEGALDPETAAKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFDMEADDASLRFELAADFWRTRVEPAA
ARWPGFATWLVESGAGPAALDAQLARRLKKPLAALRWDGVTEPDESAEAAAAECFAEAAR
MWAAERDAIDALLRSAQPVLNQRSHKPDAVADALAAWTAHLAQGNATAALPKAALKLTQT
ALTKATKKGGSTPAHAFFDVADALDAAVAAAEAAQRARWLALIAEWLDMAPGELAERKRT
RRVVSFDDLLANLYHALHAHPWLAETLRARYPAALIDEFQDTDPLQFAIFDRIFAPGGPL
FLVGDPKQAIYSFRAADLHTYLAARASASACYTLAVNQRSTPAIVDACNRFFMSNPRAFV
LDGLDYYAVRAGTRARTPFFDETDPGPAGDFRVWALPGGERTLLKRDAQAQAAQACAAEI
ARLMRGAREGRVRLGDKPLSPGDIAVLVQTHRQGSLVKRVLATWGIGSVELAQASVFSTG
DAEQLERVLAAIDAPGDLRRLRAALASDWFGLDAGALWRMEQGDGDASRDASAADGADAM
SWVERFSRYRLLWRERGFAVMWRTFTRELRIAERLMAGADGERRVTDINHLAELTQARAS
AQPGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAVVFCPFLNDGG
LREPPSSALPDAREYHDDAGDAVLHYGCDDEAAAHAARQALREQAAERARLVYVALTRAV
YRCYVVAGPYLSSRSTREARRSVLNWLVAGAGQSFDAWLDEPPDEAALDAAWQALAGGPV
CVAPLPAPARRERLAAGHDASQTLAARHATRVLRDAWRMASFSSLTASMAREEAGVAAVP
DDELRPDHDALDEVTPDGEWLFADPVVAEPPDDDILVFPRGAAAGECLHRLFELSRFTEP
ESWHKAALGALHDRPVEAEPELATRLPAMMAQLVDDVVHTELVPGMRLVDLDPAKRLDEM
GFLFPAPSLDLTALRRLLVAHGYPDVALEAGMLAGFIKGFIDMIVEHDGRFWIVDWKSNH
LGTTPDAYGPRALDVAMADHAYHLQALLYTVALHRYLRGRLPDYDYDTHIAGYLYLFVRG
VRPGWRSSGEPAGVHARRPARALVDALDRMMEGGRA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtgtcgcagccgcagcaggcgctcgaactcgacgtgttcgcgtgcccgctc
gacggcgtcaaccagatcgaggcgtcggccggcaccggcaagacctggaacatctgcgcg
ctgtatgtgcgcctgctgctcgaaaaagatctcggcgcggacgaaatcctcgtcgtgacc
ttcacgaaagcagcgacggccgaactgcacgagcggattcgcagccggctcgcgcagctt
gcgcatgcactcgacacgggcgacgacggcggcgatccgttcatcgcgcgcctgctcgag
accacgcttggcgacgaaggcgcgctcgatcccgagacggccgcgaagcggatccggcgc
gcgctgcgtgcgttcgaccaggccgcgatccatacgatccacgcgttctgccagcgcgcg
ctgcaggaagcgccgttcgcggcggcgatgccgttcgcgttcgacatggaggccgacgac
gcgtcgctgcgcttcgaactcgcggcggatttctggcgcacgcgtgtcgaaccggcggcc
gcacgctggccgggcttcgccacctggctcgtcgaatcgggggccggcccggccgcgctc
gatgcgcagctcgcgcgccggctgaagaagccgctcgccgcgctgcgctgggacggcgtg
accgagcctgacgaatcggccgaagcggccgcggccgaatgcttcgccgaggcggcgcgg
atgtgggcggccgagcgcgatgcgatcgatgcgctgctgcgctccgcgcagcccgtgctc
aatcagcgttcgcacaagcccgacgcggtcgccgatgcgctggctgcatggacggcgcat
ttggcgcagggcaatgcgacggccgcactgccgaaagccgcactgaagctcacgcaaacc
gcgctgacgaaggcgacgaaaaagggcgggtcaacgcccgcgcatgcgtttttcgatgtc
gcggacgcgctcgacgccgcagtggccgccgccgaggccgcgcagcgcgcgcgctggctc
gcgctgatcgccgaatggctcgacatggcgcccggcgaactggccgagcgcaagcgcacg
cgtcgcgtcgtgtcgttcgacgatctgcttgcgaacctgtatcacgcgctgcatgcgcat
ccgtggctggccgagacgctgcgcgcgcgctatccggccgcgctgatcgacgagttccag
gataccgacccgctgcagttcgcgatcttcgaccggatcttcgcgccgggcggcccgctg
tttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggccgatctgcatact
tatcttgcggcgcgcgcgagcgcgagcgcgtgctacacgctcgcggtcaaccagcgttcg
acgcccgcgatcgtcgatgcgtgcaaccgcttcttcatgtcgaatccgcgcgccttcgtg
ctcgacgggctcgactattacgcggtgcgcgccggcacgcgcgcgcgcacaccgttcttc
gacgaaaccgatccgggcccggccggcgatttccgcgtgtgggccctgcccggcggcgaa
cgcacgctgctcaagcgcgacgcccaggcgcaggccgcgcaggcctgcgcggccgaaatc
gcgcggctgatgcgcggtgcgcgcgaagggcgcgtgcggctcggcgacaagccgctgtcg
ccgggcgacatcgcggtgctcgtgcaaacgcaccggcagggcagtctcgtgaagcgcgtg
cttgccacgtggggcatcggcagcgtcgaactggcacaggcgtcggtgttttccaccggc
gacgccgagcagctcgagcgcgtgctggcggcgatcgatgcgccgggcgacctgcggcgt
ctgcgtgcggcgctcgcgtccgactggttcggcctcgatgccggcgcattgtggcgcatg
gagcagggcgacggcgatgcctcccgcgacgcgtcggcggccgacggcgccgatgcgatg
agctgggtcgagcgcttctcgcggtatcggctgttgtggcgcgaacgcggtttcgcggtg
atgtggcgcacgttcacgcgcgagctgcggatcgccgaacggctgatggccggtgcggac
ggcgagcgtcgcgtgacggacatcaaccatctggccgagctgacgcaagcgcgcgcatcc
gcgcagccgggtatcgcgccgacgctgcgctggctcgccgcgcaacggctcgacggtggc
ggcgaggaggcgcagttgcggctcgaatcggatcgcaacctcgtgcagatcgtgaccgtg
cacaaatcgaagggcctcgaatacgcggtcgtgttctgtccgttcctgaacgacggcggg
ttgcgcgagccgccttcgtccgcgctgcccgatgcgcgcgagtatcacgacgatgcgggc
gacgcggtgctgcattacggatgcgacgacgaggcggccgcgcatgcggcgcggcaggca
ttgcgcgagcaggccgcggaacgtgcacggctcgtctacgtggcgctcacgcgcgcggtc
tatcgctgctacgtggtcgcggggccgtacctgtcgtcgcgttcgacgcgcgaagcgcgg
cgcagcgtgctcaactggcttgtcgccggcgccggccagtcgttcgatgcgtggctcgac
gaaccgcccgacgaagctgcgctcgacgcggcgtggcaggcgctcgcgggcggccccgtg
tgcgtcgcgccgctgccggcgcccgcgcgccgcgagcgtctcgcggccgggcacgacgcc
tcgcagacgctcgcggcgcgccatgcgacgcgcgtgctgcgcgatgcgtggcggatggcg
agtttcagctcgctgaccgcgtcgatggcgcgcgaggaggcgggtgttgcggcggtaccc
gacgacgagctgcgacccgatcacgatgcgcttgacgaggtgacgccggacggcgaatgg
ctgttcgccgatccggtcgtggccgagccgccggacgacgacatcctcgtgttcccgcga
ggagcggccgccggcgaatgcctgcaccgcctgttcgaactcagccggttcacggaaccc
gaatcgtggcacaaggccgcgctcggcgcgttgcacgaccggccggtcgaggccgaaccg
gaactcgcgacgcgcctgccggcgatgatggcgcagctcgtcgacgatgtcgtgcacacc
gagctcgtgccgggcatgcggctcgtcgatctcgatccggcgaagcggctcgacgaaatg
ggtttcctgttcccggcgccgtcgctcgacctgacggcgctgcgccggctgctggtcgcg
cacggttatccggacgttgcactggaggcgggcatgctcgccggtttcatcaagggtttc
atcgacatgatcgtcgaacacgacggccgtttctggatcgtcgactggaagtcgaaccat
ctcggcacgacgccggatgcctacggcccgcgcgcgctcgacgtcgcgatggccgatcac
gcgtatcacctgcaggcgctgctctacacggtcgcgctgcatcgctacctgcgcgggcgg
ctgcccgattacgactacgacacacacatcgcgggctatctgtacctgttcgtgcgcggc
gtgcggccgggctggcgcagcagcggcgagccggccggcgtgcatgcgcggcggcccgcg
cgcgcgctcgtcgacgcactcgaccggatgatggaagggggccgcgcatga
DBGET
integrated database retrieval system
