Burkholderia arboris: NLX30_10535
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Entry
NLX30_10535 CDS
T08608
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bari
Burkholderia arboris
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bari03009
]
NLX30_10535 (rimO)
Enzymes [BR:
bari01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NLX30_10535 (rimO)
Ribosome biogenesis [BR:
bari03009
]
Prokaryotic type
ribosomal protein modification factors
NLX30_10535 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UTV53328
LinkDB
All DBs
Position
1:complement(2170677..2172038)
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AA seq
453 aa
AA seq
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MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFTDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVLERVQKW
REICPDLTIRSTFIAGFPGETEEQFETLLDFIREAELDRVGCFAYSPVEGATANELDGAL
PDDVREERRARFMEVAEEVSANRIQRKVGKTLKVLIDEVSEEGGIGRTAADAPEIDGVVY
VEPATKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatcccccaaagtagggttcgtatccctcggctgccccaaggcgctcgtcgac
tccgaacaaatcatcacgcagctgcgcgccgaaggttatgaaatctccggcacctacgac
ggcgccgacctcgtcgtcgtgaacacctgcggcttcatcgacgaagccgtgcaggaaagt
ctcgacgcgatcggcgaagcgctgaccgagaacggcaaggtgatcgtcactggctgcctt
ggcgcgaagtcgagcgccagcggctcgaacctgatcgaggaagtccatccgaaggtgctc
gccgtcaccggcccgcacgcggtgggcgaagtgatgcaggctgtgcattcgcacctgccg
aagccgcacgacccgttcaccgacctcgtgccggcggccggcatcaagctcacgccgcgc
cactacgcgtacctgaagatctccgaaggctgcaaccaccgttgcacgttctgcatcatc
ccgtcgatgcgcggcgacctcgtgtcgcgcccggtcgccgaagtgatgctggaagccgag
aacctgttcaagtcgggcgtgaaggaactgctcgtgatctcgcaggacacgagcgcttac
ggcgtcgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacgcgcatg
accgacctggtcgccgcgctcggcgaactcgcggcacagtacggcgcatgggtgcgcctg
cactacgtgtacccgtatccgagcgtcgatgaagtgattccgctgatggccgaaggcccg
ttcaaggggcacgtgctgccgtatctcgacgtgccgttccagcacgcgcatccggaagtg
ctgaagcgcatgaagcgtccggcgaacgccgagaaggtgctcgagcgcgtgcagaagtgg
cgcgagatctgccccgacctgacgatccgcagcacgttcatcgcgggcttccccggcgag
acggaagagcagttcgaaacgctgctcgacttcatccgcgaggcggaactcgatcgcgtc
ggctgcttcgcgtattcgccggtcgaaggcgcgacggcaaacgaactcgacggcgcgctc
ccggatgacgttcgcgaggaacgccgcgcgcgcttcatggaagtcgccgaggaagtgtcg
gcgaaccgcatccagcgcaaggtcggcaagacgctgaaggtgctgatcgacgaagtcagc
gaggaaggcggtatcggccgcacggcagccgatgcgccggaaatcgacggcgtcgtctat
gtcgagccggcgacgaaggcatcgaagcgctacaaggtcggcgatttcgtatccgtgaag
atcacgggcgccgacggtcacgatctgtggggcgaggtgtaa
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