Burkholderia arboris: NLX30_13220
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Entry
NLX30_13220 CDS
T08608
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bari
Burkholderia arboris
Pathway
bari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLX30_13220 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bari03019
]
NLX30_13220 (pnp)
03016 Transfer RNA biogenesis [BR:
bari03016
]
NLX30_13220 (pnp)
Enzymes [BR:
bari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NLX30_13220 (pnp)
Messenger RNA biogenesis [BR:
bari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NLX30_13220 (pnp)
Transfer RNA biogenesis [BR:
bari03016
]
Prokaryotic type
tRNA degradation factors
NLX30_13220 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
UTV53829
LinkDB
All DBs
Position
complement(2741551..2743698)
Genome browser
AA seq
715 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEVPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTRDQIKASSLDLV
VAGTERAVLMVESEADQLSEEVMLGAVVFGHEQMQIAIDAIHELVREGGKPEWDWQPAPK
NEPLIARVTELAQNDLLAAYQLRDKQARSAKLKEVYSATSAKLEEDAQAAGTVAADKATV
GNVLFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVK
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTNSDGMAEAKKRIEQITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAATQSDTPPQQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaagtcgctcgccaggcgagcggtgcggtgatcgtcgacgtcgaagatacc
gtcgtgctggcaaccgtcgtcggcgcgaagtcggcaaagccgggccaggatttcttcccg
ctgaccgtcgactacctcgagaagacctactcggccggcaagatcccgggcggcttcttc
cgccgcgaaggccgtccgtcggagcatgagacgctgacgtcgcgcctgatcgaccgtccg
ctgcgcccgctgttcccggaaggcttctacaacgaagtccaggtcgtgatccacgtgctg
tccgtgaacccggaagtccctgcggacatccccgcgctgatcggcgcatcggctgcgctc
gccgtgtcgggcctgccgttcaacggcccggtcggtgccgcacgcgtggcgtacatcgac
aacgcatacgtgctgaacccgacgcgtgaccagatcaaggcatcgagcctcgacctcgtc
gtcgcgggtacggaacgcgccgtgctgatggtcgaatcggaagccgaccagctgtcggaa
gaagtgatgctgggcgccgtggtgttcggccacgagcagatgcagatcgcgatcgacgcg
atccacgaactggtgcgcgaaggcggcaagcccgagtgggactggcagccggcgccgaag
aacgagccgctgatcgcacgcgtgaccgagctggcgcagaacgacctgctcgccgcttac
caactccgcgacaagcaagcgcgttcggcgaagctgaaggaagtctactcggcaacgtcg
gcgaagctcgaggaagacgcacaggcggccggtacggtcgcggccgacaaggccaccgtc
ggcaacgtgctgttcgacatcgaagcaaagatcgtccgttcgcagatcctgaacggcgag
ccgcgtatcgacggccgcgacacgcgcaccgtgcgcccgatcgaaatccgcaccggcgtg
ctgccgcgtacccacggctcggcgctgttcacgcgcggcgagacgcaggcgctggtcgtc
gcgacgctcggcacgaagggtgacgagcagatcatcgatgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgcccccgttcgcgaccggcgaaacgggccgcgtc
ggctcgccgaagcgccgcgaaatcggccacggccgtctcgcgaagcgcgcgctggtcaag
tgcctgccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgaa
tcgaacggttcgtcgtcgatggcatcggtgtgcggcggctgcctcgcactgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggtatcgcgatgggcctgatcctcgaaggcaac
aagttcgcggtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcacggaacaaggcgtgacggcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcatgcacatc
cttggcaagatgacgtcggcagtctcgggtgcgaacacgcaactgtcggaattcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgatccgcgcgctgacggaagaaacgggcacgaccatcgacatctcggacgacggc
gtcgtgacgatcgcgagcacgaacagcgacggcatggccgaagcgaagaagcgcatcgag
caaatcacggccgagatcgaagtcggccaagtgtacgaaggcacggtgctcaagctgctc
gatttcggcgcgatcgtgaacctgctgccgggcaaggacggcctgctgcacatctcggaa
atcgtcaacgagcgtgtgaaggacatcaacgactacctgaaggaaggtcagcaggttaag
gtcaaggtcattcagacggacgagaagggtcgtgtgcgactgtccgccaaggcgctgctg
aacgaagcagccgcggcaacgcagtcggatacgccgccgcagcagtaa
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