Burkholderia arboris: NLX30_13530
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Entry
NLX30_13530 CDS
T08608
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bari
Burkholderia arboris
Pathway
bari03030
DNA replication
bari03430
Mismatch repair
bari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLX30_13530 (dnaE)
03430 Mismatch repair
NLX30_13530 (dnaE)
03440 Homologous recombination
NLX30_13530 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bari03032
]
NLX30_13530 (dnaE)
03400 DNA repair and recombination proteins [BR:
bari03400
]
NLX30_13530 (dnaE)
Enzymes [BR:
bari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLX30_13530 (dnaE)
DNA replication proteins [BR:
bari03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLX30_13530 (dnaE)
DNA repair and recombination proteins [BR:
bari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLX30_13530 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
UTV53890
LinkDB
All DBs
Position
complement(2806100..2809630)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRIDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWITNPDDRDKPSRLLLLVKDKVGYLNLCELLSKAWLTNQYRGRAELDASW
LDGELAQGLLALSGAQQGDIGLALAAGNEEAARRHAERWAKVFPGGFYIELQRYGQPGAE
AYIQQAATLAAALKLPVVATHPTQFMTDDDFTAHEARVCISEGDILANPRRQKRFTTDQY
FRTQDDMAALFADLPSAIANTVEVAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSKE
GLETRLAQLYPAEAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIADAMK
EEPQLQERYDHEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWSLAQVPLDDAASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAATNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCAVNNLVVLPPDINQSHYRFEPVAEADGKRSRTIRYGLGAVK
GSGQNAIEEILRAREEKAFTDLFDFCERIDRRVVNRRTVEALIRAGAFDSLNANRAQLIA
SVPLAMEAADQAEANAMQAGLFDMGAESPHAHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKVGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGSGQCEIT
IFNEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTTDTVMDLERARSRYAQAVRLTMN
GNADAVALRRVLEPHVSKDEPAANAVDAPAPRGGGRDGGRRPQAPLPNGLAVQIHYSNAR
AQGEMRLGDAWRVKPSDVLLAELREAFDGSVVEITY
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgcttcgtccatcttcgcgttcactccgaattctcgattgccgacggc
atcgtgcgcattgacgacatcgtcaaggcggcggccgcagacggtcagggcgcgctcgcg
ctcaccgatctcggcaacgcattcggcctcgtccgtttctaccaggaagcccgcggcaag
ggcatcaagccgatcgccggctgcgacgtctggatcaccaatccggacgatcgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaaggtcggctacctgaatctctgcgagctg
ctgtcgaaggcgtggctcacgaaccagtaccgcggccgcgcggagctcgacgcgagctgg
ctcgacggcgagctcgcgcaggggctgctcgcgctgtcgggggcgcaacagggcgacatc
gggctcgcgctcgccgcaggcaacgaggaagccgcgcgccgtcacgccgagcgctgggcg
aaagtgttcccgggcggcttctacatcgagctgcagcgttacggccagccgggtgccgag
gcgtacatccagcaggccgcgacgctcgccgcggcgctgaagctgccggtcgtcgcgacg
cacccgacgcagttcatgaccgacgacgatttcaccgcgcacgaggcgcgcgtgtgtatc
tcggaaggcgacatcctcgcgaacccgcggcgccagaagcgtttcacgaccgaccagtat
ttccgcacgcaggacgacatggccgcgctgttcgccgacctgccgtcggcgatcgcgaac
acggtcgaagtcgcgaagcgctgcaacctgaagctcgagctcggcaagccgaagctgccg
ttgtttccgacgccggacggcatgtcgctcgacgattacctcgtccagctgtcgaaggaa
gggctcgagacccgtctggcgcagctgtatccggccgaagccgaacgcgacgcgcagcgc
gacacgtactacaagcgtctcgaattcgagtgcggaaccatcacgaagatgggtttcccc
ggctacttcctgatcgtcgcggacttcatcaactgggcaaagaacaacggcgtgccggtc
ggtccgggccgtggctcgggcgccggttcgctggtcgcgtacgcgctcggcattaccgat
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaacccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatccagtacgtg
aaggagaagtacggcgcggacgccgtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggccgcgtgctcgacctcggctacatgttcaccgatggc
atcgccaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaaa
gaggagccgcagctgcaggagcgctacgaccacgaggacgaagtgcaccagctgctcgat
ctcgcgcagcgcgtcgagggtctcacgcgtaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgcccgctgtacacgcagggcgacgacggcggc
gtggtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctgggtctcacgacgctgacgatcctcgactgggccgagcgctacatccgccgcctcgat
ccgtcgaaggccgactggtcgctcgcgcaggtgccgctcgacgacgccgcgtcgttccag
atcctgaagaaggccaacacggtcgcggtgttccagctggaaagccgcgggatgcagggc
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cgtccgggcccgatggacctgatcccgagcttctgcgcacggaaacacggccgcgagaag
gtcgactatccggatccgcgcgtcgaacccgtcctgaaagagacctacggcatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcc
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgagggcgcggcgacgaacggcctcacgcgcgaaaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtacgca
ctgctcgcgtattacaccgcgtggctgaaggcacatcatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgactgcgcc
gtgaacaacctcgtcgtgctgccgccggacatcaaccagtcgcactaccggttcgagccg
gtcgccgaagccgacggcaagcgctcgcgcacgatccgctacggcctcggcgcggtgaag
ggcagcggccagaatgcgatcgaggaaatcctgcgcgcccgcgaggaaaaggcattcacc
gatctgttcgacttctgcgaacggatcgaccggcgcgtcgtcaatcgccgcacggtcgag
gcgctgatccgcgccggcgcgttcgactcgctgaacgcgaaccgtgcgcagttgatcgcg
tcggtgccgctcgcgatggaagcggccgaccaggccgaagcgaacgcgatgcaggccggc
ctgttcgacatgggcgccgagtcgccgcacgcgcatgcgctcgtcgacgaacccgcgtgg
gacgacaagcgccgcctgcaggaagaaaagggcgcgctcggcttctatctgtccggccac
ctgttcgacgcctatcgcgatgaagtgcgccgcttcgtgcggcagaaggtcggcgacctg
aaggaagggcgcgacaagctcgtcgcgggcatcatcgcgtcgctgcgcacgcagatgacc
cagcgcggcaagatgctgatcgcgctgctcgacgacgggtcgggccagtgcgagatcacg
atcttcaacgaacagttcgaggccaacaaggcgctgttcaaggaagacgagctgttgatc
gtgcaggggcaggcgcgcaacgacgcgttcaccggcggcatccgcttcacgaccgatacc
gtgatggatctcgaacgcgcgcgcagccgctatgcgcaggccgtgcggctgacgatgaac
ggcaacgccgacgcggtcgcgctgcgccgcgtgctggagccgcacgtgtcgaaggacgag
ccggccgcgaatgcggtcgacgcgcccgcgccgcgcggcggcgggcgcgatggcggccgc
cgcccgcaggcgccgctgccgaacgggctcgcggtccagatccactacagcaatgcgcgg
gcgcagggcgaaatgcgtctcggcgacgcgtggcgcgtgaagccgagcgacgtgctgctg
gcggagttgcgtgaggcgttcgacggcagcgtcgtcgaaatcacctactga
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