KEGG   Burkholderia arboris: NLX30_16155
Entry
NLX30_16155       CDS       T08608                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bari  Burkholderia arboris
Pathway
bari02020  Two-component system
bari02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bari00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NLX30_16155
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NLX30_16155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bari03021]
    NLX30_16155
Transcription machinery [BR:bari03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NLX30_16155
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_Crp_2 HTH_23 TRF
Other DBs
NCBI-ProteinID: UTV54395
LinkDB
Position
3353805..3355310
AA seq 501 aa
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAVAQNPLLENDDEWIASPLRV
AADGSLIAQTPPGQHNEPASTNGSSTSGDRAERDEPAGADEYDSYGSGDGNDGPQWNLDE
FGRASGASDDDDLPPLQVQEAATSLRDHLSAQLRVTQASPRDRALVMFLIESLDDDGYLT
ATLDEVLADLPPELEIDCDELNAALALLHSFDPPGVGARSASECLKLQLLRLDPSPTRTL
ALEIVSQHLELLAARDFTRLRKHLKASDDALRDAHALIRSLEPFPGAAYGKAEADYVVPD
IIVKKAGQGWLAELNPEVMPRLRINNLYANILRNSRGDPSAGSLKQQLQEARWLIKNIQQ
RFDTILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPFG
TLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVVAR
RTVAKYREALKIPAVNLRKSL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgaaagccagccttcaactccgcctgtcgcaacatctggcgctgacgccgcagctgcag
cagtcgatccggctcctgcagttgtcgacgctcgaattgcagcaggaagtcgcgatggcc
gtcgcgcaaaacccgttgctcgagaacgacgacgaatggatcgcgagcccgctgcgcgtc
gcggcggacggatcgttgatcgcgcagacgccccccgggcagcataacgagccggcctcg
acgaacggcagcagcacgtccggcgatcgcgcagagcgcgacgagccggctggcgccgac
gaatacgacagttacgggtccggcgacggcaacgacggcccgcaatggaatctcgatgaa
ttcggccgcgcgagcggcgcgtccgacgacgacgacctcccgccgctgcaggtgcaggaa
gccgcgacgtcgctgcgcgaccacctgtccgcgcaattgcgcgtcacgcaggccagcccg
cgcgatcgcgcgctcgtgatgttcctgatcgagtcgctcgacgacgacggctacctgacc
gcgacgctcgacgaagtgctcgccgacctgccgcccgagctggagatcgactgcgacgag
ctgaacgcggcgctcgcgctgctgcacagcttcgacccgcccggcgtcggcgcacgctcg
gcgtcggaatgcctgaagctgcagttgctgcgcctcgatccgtccccgacgcgcacgctc
gcgctcgagatcgtgtcgcagcacctcgaactgctcgcggcccgcgatttcacgcggttg
cgcaagcacctgaaggcaagcgacgacgcgctgcgcgacgcgcatgcgctgatccgctcg
ctggagccgttccccggcgccgcgtacggcaaggccgaggccgactacgtcgtgcccgac
atcatcgtgaagaaggccggccagggatggctcgcggagctcaatccggaggtcatgccg
cgcctgcggatcaacaacctgtacgcaaacatcctgcgcaacagccgcggcgatccgtcg
gccggttcgctgaagcagcagctccaggaagcacggtggctgatcaagaatatccagcag
cgtttcgacacgatcctgcgtgtcgcgcaggctattgtcgagcgtcagaagaatttcttt
gcgcacggtgaaattgccatgcgccccttggttttgcgggaaatagctgatacgctgggc
ctacacgagtcgactgtcagccgtgtgacaaccgggaagtacatgctgaccccgttcggg
acgcttgaatttaagtacttcttcggatctcacgtttcgaccgacaccggtggcgccgcc
tcgtcgaccgccatccgagccctcatcaagcaactgataggagctgaagacccaaaatcg
ccactttcggacagccgcattgccgagctgctggcagaacagggtttcgtggtcgcacgc
cgcacggttgcgaaatatcgcgaagccctcaaaatcccggcagtgaatctgcgcaagtct
ctttag

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