Burkholderia arboris: NLX30_20535
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Entry
NLX30_20535 CDS
T08608
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bari
Burkholderia arboris
Pathway
bari03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NLX30_20535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bari03000
]
NLX30_20535
03400 DNA repair and recombination proteins [BR:
bari03400
]
NLX30_20535
Enzymes [BR:
bari01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NLX30_20535
Transcription factors [BR:
bari03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NLX30_20535
DNA repair and recombination proteins [BR:
bari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NLX30_20535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
TetR_N
Motif
Other DBs
NCBI-ProteinID:
UTV58537
LinkDB
All DBs
Position
pla_1:483362..484831
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AA seq
489 aa
AA seq
DB search
MVYSRRMRLDPDTCYDALLSRNRRFDGWFFVGVATTGVYCRPVCPVKPPKAQNCSYYPTA
AAAEKAGFRPCMRCRPELAPGHGLLDLSGNLADAAASLIEDGFLNAHSVDALAQRVGVTE
RHLRRIFGAQFGVSPVEFAQTHRLLMAKRLLTDTALPVAVVASTAGFGSVRRFNDLFRQR
YGLNPLRLRKGASASADGDMTFPLPYRPPFAWDDLMRFLAQRQIDGVERIDAQGYARVVD
MPDRNDGGRVTGWLSVAHVPQRFALAVTVSRALTPVVPAVLARVRRLFDLDSRPDVIDAH
LGDLASGSPGLRVPGAFDGLEIAIRAIAGEQLAAADAGTPAPARIAERFGAPVEGAPPGL
THALPSAATLAALPPSALETIGIKRDTARAIVSLARAVDDGTLALEPMAPLDPTLAALRA
MPGFDERAVQYVAMRAMAWPNAFPADDAWLPARTERATMPSSAPHAARWAPWRAYAALHV
WRLHGDAAR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtttacagtcgtcgcatgcgcctcgatcccgacacctgctacgacgccctgctttcg
cggaaccgccgcttcgacggctggttcttcgtcggcgtggcgacgaccggtgtgtattgc
cgccccgtttgcccggtgaagccgccgaaggcgcagaactgcagctactacccgaccgcc
gcagccgccgagaaagccgggttccggccctgcatgcgctgccgccccgaactcgcgccc
ggccacgggctgctcgacctgtccggcaatctcgccgacgcagccgcctcgctgatcgag
gacggtttcctgaacgcacattccgtcgacgcgctcgcgcagcgcgtcggcgtgaccgag
cggcatctgcggcggatcttcggcgcgcaattcggcgtgtcgccggtcgagttcgcgcag
acgcaccggctgctgatggccaagcggctgctgaccgataccgcgctgccggtggccgtc
gtcgcgtcgacggccggattcggcagcgtgcggcgcttcaacgacctgttccgccagcgc
tatggcctcaacccgctgcggctgcgcaaaggcgccagtgcatcggccgacggcgacatg
acgttcccgctgccgtaccggccgccattcgcgtgggacgacctgatgcgctttctggcg
cagcggcagatcgacggcgtcgagcggatcgatgcgcagggttatgcgcgtgtcgtcgac
atgccggaccggaacgacggtggccgcgtgacgggctggctatccgtcgcacacgtgccg
cagcgcttcgcgctggccgtcaccgtgtcgcgcgcgctgacgccggtcgtcccggccgtg
cttgcccgcgtgcggcggctgttcgatctcgacagccggcccgacgtgatcgacgcgcat
ctcggcgatctcgcgagcggctcgccgggcctgcgggtgcccggcgcgttcgatggcctc
gagatcgcgattcgcgccatcgcaggcgaacagctggcggcggcggatgcgggtacgcct
gcgccggcacgcattgcagaacgcttcggcgccccggtcgaaggcgcgccgccgggcctc
acgcacgcgttgccgtccgctgcaacgctggccgccctgccgccttcggccctcgaaacc
atcggcatcaagcgcgatacggcacgggcaatcgtgtcgctcgcacgcgcagtcgacgac
ggcacgctcgccctcgaacccatggcgccgctcgatccgacgctcgccgcgctgcgcgcg
atgcccggcttcgacgaacgcgcggtgcagtacgtcgcgatgcgtgcgatggcctggccg
aatgcgttccccgccgacgatgcgtggcttcccgcacgcaccgaacgcgcgaccatgcca
tcatctgcgccgcatgcggcgcgctgggcgccgtggcgcgcgtatgccgcactgcatgtg
tggcgacttcatggagatgcagcgcgatga
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