Burkholderia arboris: NLX30_25260
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Entry
NLX30_25260 CDS
T08608
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bari
Burkholderia arboris
Pathway
bari00260
Glycine, serine and threonine metabolism
bari01100
Metabolic pathways
Module
bari_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NLX30_25260
Enzymes [BR:
bari01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
NLX30_25260
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
NLX30_25260
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
FAD_binding_2
NAD_binding_8
HI0933_like
FAD_binding_3
DAO
Pyr_redox
GIDA
Thi4
NAD_binding_7
AlaDh_PNT_C
XdhC_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
UTV59431
LinkDB
All DBs
Position
pla_1:1518558..1521569
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AA seq
1003 aa
AA seq
DB search
MSQKDRLGTGGRINRAIPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
VTADVAEPNAVVQLESGPYTVPNARATEIELYQGLVATSVNAEPTLENDKYAINQKFSRF
MPAGFYYKTFMWPRNMWPKYEEKIREAAGLGKAPEVLDADRYDKCYAHCDVLVVGGGPSG
LAAAHAAATAGARVILVDDQRELGGSLLSCRAEIDAKPALQWVEKIEAELRKLPDVTILS
RSTAFGYQDHNLVTVTQRLTDHLPVSMRKGTRELLWKVRAKRVILATGAHERPIVFGNND
LPGVMLAGAVSTYVHRFGVLPGRNAVVFTNNDRAYQTALDLKACGAKVTVVDSRASSNGA
LPAAAKRQGVTVMSGAVVTAASGKWRVSSVDVASLSNGQVGGKLQTLPCDLVAMSGGFSP
VLHLFAQSGGKACWNDEKACFLPGKPVQAEASIGAAAGEFGLARALRLAVDAGAEAAKAA
GFAAAQRPAAPQVAEAVEGALQPLWLVGSREAAARGPKQFVDFQNDVAAADILLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAGALGKTIPETGTTTFRPNYTPVSFGTFAG
RETGDFLDPIRKTAVHEWHVEHGAAFEDVGNWKRPWYFPKNGEDLHAAVKRECLAVRNSV
GILDASTLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLA
DQHFMMTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVC
QDIDFGNEAFPFMSYRNGTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSITPYDLGMGGVVAKSKDFLGKRSLTRSDTA
KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSAVDPTPMIGHVTSSYYSPILKRSIALA
VVKGGLNKMGESVVIPLANGKRITAKISSPVFYDTEGVRQHVE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgtctcggcaccggtggccggatcaatcgcgcgattccgttgacg
ttcacgttcaacggccgcacgtaccagggcttccagggcgacacgctcgcgtccgcactg
ctcgcgaacggcgtgcacttcgtcgcgcgcagcttcaagtaccaccgcccgcgcgggatc
gtgacggcggatgtggccgaaccgaatgccgtcgtgcagctcgagtccggcccgtatacc
gtgccgaacgcgcgcgcgaccgagatcgagctgtaccaggggctcgtcgcgacgagcgtg
aacgccgagccgacgctcgagaacgacaagtacgcgatcaaccagaagttctcgcgcttc
atgccggccgggttctactacaagacgttcatgtggccgcgcaacatgtggccgaagtac
gaagagaagatccgcgaagcggccggcctcggcaaggcgcctgaagtgctcgacgccgat
cgctacgacaagtgctacgcgcattgcgacgtgctcgtggtcggcggtggcccgtcgggc
ctcgccgccgcgcatgcggccgcgacggccggcgcgcgcgtgatcctcgtcgacgaccag
cgcgaactcggcggcagcctgctgtcgtgccgcgcggagatcgacgcgaagcccgcgctg
cagtgggtcgagaagatcgaggccgaactgcgcaagctgcccgacgtgacgatcctgtcg
cgcagcaccgcgttcggctaccaggaccacaacctcgtgacggtcacgcagcgcctgacc
gatcacctgccggtgtcgatgcgcaagggcacgcgcgaactgctgtggaaggtccgcgcg
aagcgcgtgatcctcgcgaccggtgcgcacgagcgtccgatcgtgttcggcaacaacgac
ctgccgggcgtgatgctcgccggcgcggtatcgacctacgtgcatcgcttcggcgtgctg
ccgggccgcaacgcggtcgtgttcacgaacaacgatcgtgcgtaccagaccgcgctcgac
ctgaaggcatgcggcgcgaaggtgacggtcgtcgattcgcgcgcctcgtcgaacggcgcg
ctgccggctgcggccaagcggcagggcgtgacggtgatgagcggcgcggtcgtcacggcc
gcatcgggcaagtggcgcgtatcgtcggtcgacgtcgcgtccctctcgaacggccaggtg
ggcggcaagctgcagacgctgccgtgcgacctcgtcgcgatgtcgggcgggttcagcccg
gtgctgcacctgttcgcgcagtcgggcggcaaggcttgctggaacgacgaaaaggcgtgc
ttcctgccgggcaagcccgtgcaggcggaagcgagcatcggtgcggcggccggcgaattc
ggcctggcgcgcgcgctgcggctcgccgtcgatgcaggcgcggaagcagcgaaggccgcg
ggcttcgcggccgcgcagcgtccggccgcaccgcaagtcgccgaagcggtcgaaggcgca
ctgcagccgctgtggctcgtcggcagccgcgaggcagccgcacgcgggccgaagcagttc
gtcgatttccagaacgacgtggcggctgccgacatcctgctcgccgcgcgcgaaggcttc
gagtcggtcgagcacgtgaagcgctacacggcgatgggcttcggcaccgaccagggcaag
ctcggcaacatcaacgggatggcgattctcgcgggcgcgctcggcaagacgattccggaa
acgggcacgacgacgttccgcccgaactacacccccgtgtcgttcgggaccttcgccggc
cgcgagacgggcgatttcctcgacccgatccgcaagacggccgtgcacgaatggcacgtc
gagcacggcgcggcgttcgaggacgtcggcaactggaagcggccgtggtatttcccgaag
aacggcgaagacctgcatgcggccgtgaagcgcgaatgcctcgcggtgcgcaacagcgtc
ggcatcctcgacgcgtcgacgctcggcaagatcgacatccagggccccgacgcggtgaag
ctgctgaactggatgtacacgaacccgtggaacaagctcgaaatcggcaagtgccgctac
gggctgatgctcgacgagaacgggatggtgttcgacgacggcgtgaccgtgcgcctcgcc
gaccagcatttcatgatgaccaccaccaccggcggcgccgcgcgcgtgctcacgtggctc
gagcgctggctgcagaccgaatggcccgacatgaaggtgcggctcgcgtccgtcaccgat
cactgggcgacgttcgcggtggtcggcccgaagagccgcaaggtcgtgcagaaggtgtgc
caggacatcgacttcggcaacgaggcgttcccgttcatgagctaccggaacggcaccgtc
gcgggcgcgaaggcgcgcgtgatgcggatcagcttctcgggcgagctggcctatgaagtg
aacgtgccggcgaacgcgggccgcgcggtgtgggaagcgctgatggcggcaggtgccgag
ttcgacatcacgccgtacggcaccgagacgatgcacgtgctgcgcgcggagaagggctac
atcatcgtcggccaggataccgacggctcgatcacgccgtacgacctcgggatgggcggg
gtcgtcgcgaagtcgaaggacttcctcggcaagcgctcgctgacgcgctccgataccgcg
aaggaaggccgcaagcagttcgtcggcctcctgaccgaagacgaacagttcgtgctgccg
gaaggcgcgcagatcatcgcgaaggacacgcaggtgtcagcggtcgatccgacgccgatg
atcggccacgtgacgtcgagctactacagcccgatcctgaagcgctcgatcgcgctcgcg
gtggtgaagggcggcctgaacaagatgggcgagagcgtcgtgattccgctggccaacggc
aagcgcatcaccgcgaagatctcgagcccggttttctacgataccgaaggggtgcgccag
catgtggaatga
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