Burkholderia arboris: NLX30_38245
Help
Entry
NLX30_38245 CDS
T08608
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bari
Burkholderia arboris
Pathway
bari02020
Two-component system
bari02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bari00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NLX30_38245 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NLX30_38245 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bari03021
]
NLX30_38245 (rpoN)
Transcription machinery [BR:
bari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NLX30_38245 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UTV60028
LinkDB
All DBs
Position
pla_2:complement(1031672..1033105)
Genome browser
AA seq
477 aa
AA seq
DB search
MSVSLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDMNPFLEDGQGDEEPAAGT
PEQPAETAAPEAAAEPDEVRPPDGEVSFTAAPAPRGTSRQGDDAGGLSPGEWIAAEPSLH
QQLHDALRLYPLNKRDREAARIVIDALDDDGYLRQELAELLVAADPALLLSEQDLAVALR
LVQMLDLPGMAARSLSECLTLQLDAMPADTPALAEAKAIAREHLERLARRETAEIQRRVG
CNPQMLHAACALVRGLDPRPGNHYGSTRGDYVVPDLIVRQVRDEWIVTINPAVLPRARLH
ERYATLFAQSSGERDSPLGQQLQEARWLIRNVQKRFDTIQRVGECIVARQRDFFRYGEIA
MKPLVLRDIAEELDLHESTVSRATGNKYMATPHGTFEFKHFFPRKLEAAGRGVCSASAAK
VLIRDMIAAERRTDPLSDVALTHNLAGRGILLARRTVTKYRQAMKIPPADLRRRGVV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctcgcttgcgctgcagatgcgacagcatctggcactcacgccgaggcttcag
cagtcgctgcggctgctgcagttgtcctcgctcgaatttcaacaggaattgcggcaagcg
ctcgacatgaatccgtttcttgaggatggccagggcgacgaggaacccgctgccggcacg
ccggagcaaccggccgaaacggctgcaccggaagcggctgccgaacccgacgaagtccgc
ccgccggacggcgaggtgtcctttacggccgcgcctgcgccgcgcggcacgagccgccag
ggcgacgacgctggcggcctgtcgcccggcgaatggatcgccgccgagccgtcgctgcat
cagcagctgcacgatgcgctccggctctacccattgaataaacgcgaccgtgaagccgcg
cgcatcgtgatcgacgcgctcgacgacgacggctacctgcgccaggaactggccgagttg
ctggtcgccgccgatccggcgctgctgctgtcggagcaggatctcgcggtcgcgctgcgg
ctcgtgcagatgctcgacctccccggcatggccgcgcgttcgttgtccgaatgcctgacg
ctgcagctcgatgcgatgccggccgacacgccggcactcgcggaagcgaaagcgatcgca
cgcgaacatctcgagcggctcgcgcgccgcgagacggccgagatccagcggcgcgtcggc
tgcaacccgcagatgctgcacgcggcatgtgcgctggtgcgcgggctcgacccgcgcccc
ggcaatcattacggcagcacgcgcggtgattacgtggtgcccgacttgatcgtgcgtcag
gtgcgcgacgagtggatcgtgacgatcaatccggccgtgctgccgcgtgcgcgcctgcac
gagcgctacgcgacgctgttcgcgcagtcgagcggcgagcgcgattcgccgcttggccag
cagttgcaggaagcgcgatggctgatccgcaacgtgcagaagcgtttcgacacgatccag
cgggtcggcgaatgcatcgtcgcgcggcagcgcgacttcttccgctacggcgagatcgcg
atgaagccgctcgtgctgcgcgacatcgcggaagaactcgacctgcatgaatcgaccgtg
tcgcgcgcgacgggcaacaagtacatggccacgccgcacggcacgttcgagttcaagcac
ttcttcccgcgcaagctcgaggcggccggccggggcgtgtgctcggcatcggccgcgaag
gtgctgatccgcgacatgatcgcggccgagcggcgtaccgatccgctgtccgacgtcgcg
ctcacgcacaacctcgccggccgtggcatcttgcttgcgcgtcgcacggtgacgaagtat
cgccaggcgatgaagatcccgccggccgacctgcggcgccgcggcgtcgtgtga
DBGET
integrated database retrieval system
