Bartonella sp. JB63: BJB63x_000220
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Entry
BJB63x_000220 CDS
T05552
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
barj
Bartonella sp. JB63
Pathway
barj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
barj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJB63x_000220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barj03019
]
BJB63x_000220
03016 Transfer RNA biogenesis [BR:
barj03016
]
BJB63x_000220
Enzymes [BR:
barj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BJB63x_000220
Messenger RNA biogenesis [BR:
barj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJB63x_000220
Transfer RNA biogenesis [BR:
barj03016
]
Prokaryotic type
tRNA degradation factors
BJB63x_000220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF1108
Motif
Other DBs
NCBI-ProteinID:
AQX28726
LinkDB
All DBs
Position
complement(25033..27234)
Genome browser
AA seq
733 aa
AA seq
DB search
MFKTHKVEIEWAGRPLILETGKIARQADGAIIATYGETVVLATVVSAKTPKPDQNFFPLT
VNYQEKNYAVGKIPGGYFKRENRSSESETLISRLIDRPIRPLFVDGYKNDTQVIASVIQH
DLENNPDILAIIASSAALTLSGIPFMGPIAAARIGYCNGQYILNPNIDEMPESKLDLIVA
GTENAVLMVESEAHELPEDVMLNAVMFGQKSFQPVINAIIKLAEVAAKKPCDFTPEDLSV
LEKNMLKMVEQDLREAYTITDKQKRYTAIDVLKEEVINKFTQETEENCEFNTDQIATVFK
HLQAKIVRQNILDTGKRIDGRNPSDVRAIQSEVGILPRTHGSALFTRGETQALVVTTLGT
GEDEQYIDSLTGMYKETFLLHYNFPPFSVGEIGRIGSPGRREIGHGKLAWRAIHPMLPTK
ESFPYTIRTVSEITESNGSSSMATVCGTSLALMDAGVPLARPVAGIAMGLIKEGERFAIL
SDILGDEDHLGDMDFKVAGTESGITSLQMDIKIDGITEEIMKIALAQAKDGRIHILNEMA
KALTSARSELSEFSPRIEIMNITVDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTIKIA
SSDLKTIEAAKHWILSIVNEPEIGAIYQGTVVKIAEFGAFVNFFGSRDGLVHISQLASER
VAKTTDIVKEGDKVWVKLMGFDERGKIRLSMKVVDQQTGKELINGGSIKTEKDNNTDEKN
PSKKKHRSKKKKD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaacccataaagtagaaattgaatgggccggtcggccacttatcctcgaaaca
ggaaaaattgcgcgtcaagcagatggtgccattattgctacatatggtgaaactgttgtt
ttggcaactgttgtttcagcaaaaactccaaaaccagatcaaaatttttttccactcacc
gttaattatcaagaaaaaaactatgcagttggtaaaatacctggtggttattttaaacga
gaaaaccgttcaagtgaaagtgaaactttgatttcacggttgattgatcgtccaattcgt
cctctttttgtcgacggttataaaaatgacacacaagtgattgcctctgttattcagcat
gatctagaaaataatcccgatatccttgctataattgcatcttctgctgcattaactcta
tcaggtattccttttatgggtccaattgccgctgctcgtattggatattgtaatggacaa
tatattctcaatcctaacattgatgaaatgcctgaatcaaaacttgatcttattgttgcc
ggaacagaaaatgctgtactgatggttgaatcagaggcgcatgaattacctgaagatgta
atgttgaatgctgtcatgtttggtcaaaaaagttttcaacctgtaattaatgccatcatc
aaacttgccgaagtagcggctaaaaaaccttgtgactttactccagaagatctgtctgtg
cttgaaaaaaacatgcttaaaatggtcgaacaggatctgagagaagcttatacaattacc
gataaacaaaaacgctatactgcgattgatgttcttaaagaagaagtcatcaataaattc
acgcaggaaacagaagaaaattgcgaatttaatacagatcagattgcaactgttttcaaa
catttgcaagcaaaaatcgttcgccaaaacattcttgatacaggaaaacgtattgatgga
cgtaatccctcagatgttcgtgcaattcaatcagaagttggtattttgccccgcacacat
ggatcagcgttatttactcgtggtgaaacacaagcacttgtagtaacaacattaggaacc
ggagaagatgaacaatatatagactccttaacgggcatgtataaagaaacattcctcctt
cattacaattttccacctttttcagtaggtgaaataggccgtattggctcacctggccgc
cgcgaaattggtcatggtaaactggcatggcgtgctattcatcccatgttgccgacaaaa
gaatcctttccctacactattcgtactgtatcagaaattaccgaatcgaatggatcttct
tcaatggcaaccgtttgcggaacttcactagcactcatggatgctggtgttcctttagca
cgccctgttgctggtattgcaatgggtttgattaaagaaggtgaacgatttgctattcta
tctgatattttaggggatgaagatcatcttggtgatatggatttcaaagtagcaggtaca
gaaagcggtattacttccttacaaatggatatcaaaattgatggcattactgaagagatt
atgaaaatcgcacttgcacaagctaaagatggtcgaatccatattctcaatgaaatggca
aaagccttaaccagtgcacggagtgaactgagcgaattttctccacgtattgaaataatg
aacattactgtagataaaattcgtgatgttatcggctctggtggtaaagtaatccgcgaa
attgtggaaaaaactggagctaaaattaatattgaagatgatggaacaattaaaattgct
tcttctgatttaaaaaccattgaagcagcaaaacattggatcctttcaattgttaatgaa
cctgaaatcggtgctatttaccaaggaacggttgttaaaattgcagaattcggtgcattc
gttaacttttttggttcacgcgatggacttgttcatatctctcaactcgcatcagaacgt
gtagcaaaaacaaccgatattgttaaagaaggtgataaagtttgggttaaattaatgggc
ttcgatgaacgtggtaaaattcggttatcgatgaaagttgttgaccaacaaactggaaaa
gaacttatcaatggtggttcaataaaaacagaaaaagataataatactgatgaaaagaat
ccatctaaaaagaaacaccgtagtaagaaaaaaaaggattaa
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