Bartonella sp. JB63: BJB63x_001450
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Entry
BJB63x_001450 CDS
T05552
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
barj
Bartonella sp. JB63
Pathway
barj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
barj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BJB63x_001450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barj03400
]
BJB63x_001450
Enzymes [BR:
barj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BJB63x_001450
DNA repair and recombination proteins [BR:
barj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BJB63x_001450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AQX28843
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Position
156935..158362
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AA seq
475 aa
AA seq
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MDLFIEKSVATNVAEFSVSEIAGALKRVVEEKFGYVRVRGEISGYRGVHASGHAYFALKD
DKARLEAVIWRGVIEKLQFPPEEGMEVVAVGKLTTYQGSSKYQIIIETLEPTGVGALMTL
LENRKKKLADEGLFDDAKKKTLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHILIWPV
RVQGETSGREVAAAIAGFNALSLDGVLSKPDLIIVARGGGSLEDLWGFNDEAVVRAVSAS
AIPIISAVGHETDWTLIDYVADWRAPTPTGAAERAVPVKFDLETQLASLSLRFRIGLARY
FSFYKQKLSAVVRGFPTVDQLFSLPRRSFDEISSRLQRALCVNYDKKRFYFYTFAIRLSP
RLLNTETAQQNTKEYTVRLHQAFLRSIEKQRTQIEMTFRLLKNTSYQSILERGFVLALGQ
ENKPIKRLVQFPRTGQVSLQFFDGEINVSTCNSAFKQFPKSKRLKNQKDDQGTLF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtttattgaaaaatcagtggcaacgaatgtagcggaatttagtgtttctgaa
atagcgggagctttaaagcgtgttgttgaagaaaagtttggttatgtacgagtgcgtggc
gaaatatcaggttatcggggtgtacacgcttcagggcatgcctattttgctttaaaagac
gataaagctcgattagaggctgttatttggcgaggtgttatagaaaaactccagtttcct
cctgaggaagggatggaagtggttgctgtgggtaagttaacaacttatcaaggatcatcg
aaatatcaaattattattgaaactcttgagccaacaggagttggcgctttgatgactctt
ttagaaaatcgtaagaagaagcttgcagatgagggattgtttgatgatgcaaagaaaaaa
actttgccttatatgcctcgaattataggagttgtgacatcaccaacaggagctgttatc
cgtgatattattcatcgtatatcggatcgttttcctttacatattttgatttggcctgta
cgggtacaaggagaaaccagtggtcgagaagtcgctgctgctattgctgggtttaatgcg
ttatctttagatggtgttttatctaaacctgatcttattattgttgcacgtggtgggggc
agtttagaagacttatggggatttaatgacgaagcagttgttcgcgctgttagtgcatct
gctattccaattatttctgcagttgggcatgaaacagactggactcttattgattatgtt
gctgattggcgggcacctactcctacaggagcagcagaaagagctgtaccagttaaattt
gatcttgaaacacaattagcatcacttagtttacgctttcgtataggattggcgcgttat
tttagtttttataaacaaaaattatctgctgttgtacgaggttttcctactgtcgatcag
ttattttccttaccaaggcgtagctttgatgaaatttcaagtcgtttgcaacgtgctctt
tgtgttaactatgataaaaaacgtttttatttttatacatttgctatccgattgtctcca
cgtttgttgaatactgaaacagcacaacaaaatacaaaagagtatactgtacgtcttcat
caagcttttttacgtagtattgaaaaacaacgcactcaaatagagatgacatttaggctt
ttaaaaaatacatcttatcaaagtattctagagcgtggttttgttttagctttagggcaa
gaaaataaaccaattaaacgattagttcagtttcctagaacaggacaggtaagcttacaa
ttttttgatggcgaaattaatgtttcaacctgtaattctgcttttaagcaatttccaaaa
tctaagcgattaaagaatcagaaagatgatcaagggacgcttttttaa
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