Bartonella sp. JB63: BJB63x_003640
Help
Entry
BJB63x_003640 CDS
T05552
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
barj
Bartonella sp. JB63
Pathway
barj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
barj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJB63x_003640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barj03400
]
BJB63x_003640
Enzymes [BR:
barj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BJB63x_003640
DNA repair and recombination proteins [BR:
barj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJB63x_003640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AQX29058
UniProt:
A0AAC9VZR7
LinkDB
All DBs
Position
complement(405943..406611)
Genome browser
AA seq
222 aa
AA seq
DB search
MNSKSTSLCPEPPPNCNLCPRLNNFIADWRIKEPHWHNAPVSPFYPHKGAATTRLLIVGL
APGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFAERSDDTLELIDAAIVNSVRCVP
PDNKPTGAEINTCRHFFSPLLTNLPKLKAIITLGSIAHNSTIRALNAKILTHPFGHGKVS
DIGRLRIFSSYHCSRYNTNTGRLTDTMFHQIFQTARIYLNQC
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaaatcaacatcattgtgcccggaaccacctccaaattgtaatttgtgtccc
cgcctaaacaactttatcgctgattggcgcattaaagaaccccactggcataatgcacct
gtaagtccattttaccctcataaaggagctgcaacaacacgtcttcttatcgtcggactt
gctcctggattacgtggagcaaacagaactggacgtcctttcacaggcgattatgctggc
catctcctttattccactttaaaaaaatttggttttgctcaaggtaccttcgcagaaaga
tcagacgataccctcgagctcattgatgcagcaattgttaattcagtgcgttgtgtccca
ccagacaataaacccactggtgctgagatcaacacttgccggcattttttttcacctctt
ttaacaaaccttcctaaactcaaagccatcattactcttggtagtattgctcataactcc
actatacgagctttaaacgcaaaaatcttaacgcacccctttggtcatggaaaagtcagt
gatatcggtagattacgtatcttttcaagctatcactgttcacgctataatactaacact
ggccgtttgacagatactatgttccatcaaatcttccaaacagcaagaatatatttaaat
caatgttga
DBGET
integrated database retrieval system
