Bartonella sp. JB63: BJB63x_004960
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Entry
BJB63x_004960 CDS
T05552
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
barj
Bartonella sp. JB63
Brite
KEGG Orthology (KO) [BR:
barj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
barj03032
]
BJB63x_004960
03400 DNA repair and recombination proteins [BR:
barj03400
]
BJB63x_004960
Enzymes [BR:
barj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BJB63x_004960
DNA replication proteins [BR:
barj03032
]
Prokaryotic type
DNA Topoisomerases
BJB63x_004960
DNA repair and recombination proteins [BR:
barj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJB63x_004960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AQX29188
LinkDB
All DBs
Position
564093..566864
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AA seq
923 aa
AA seq
DB search
MTDLTTQSEHDGLTGIKPVSIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILHAM
NGMGLSFNRSYRKSAGVVGEVMGKFHPHGDSSIYDALVRMAQDFSLRNPLIDGQGNFGSV
DGDPPAAMRYTECRLEKVAEELLADIDKETVDFQDNYDGREREPVVLPARFPNLLVNGSG
GIAVGMATNIPPHNLGEVIDACVALIDNPTITLDEIIEIIPGPDFPTGGIILGRSGIRSA
YETGRGSIIMRAKVNIEEIRNNRQAIIVSEIPYQINKATMIEKIAELVRDKRIEGISDLR
DESDRDGYRVVIELKREAVADIVLNQLYHYTPLQTSFSCNMVALNGGKPEQMTLLDMLRA
FISFREEVVSRRTKYLLRKARERAHVLVGLAIAVANIDEIIALIRKAPDPQTARIQLMER
RWLAADVASLIKLIDDPRHVVHENKTYNLSEEQARAILELRLQRLTALGRDEIADELNKI
AVDITEYLHILASRLRIMGIVKDELSSLREEFATPRRTIFGFGNTEMDNEDLIVPEDMVV
TVSHNGYIKRVPLNTYRAQRRGGKGRSGMSTKDEDFVTRLFVSNTHTPVLFFSSRGIVYK
EKVWRLPIGTPQSRGRALVNMLPLQEGERITTIMPLPEDEASWSKLDVMFATTRGTVRRN
KLSDFVQVNRNGKIAMKLDEEGDEILSVETCTEHDDVVLTTANGQCIRFPVIDVRVFAGR
NSLGVRGINMVDGDRVISMTILEHVEATSVERSVYIKRAINERRAAGADAEDVVIVDEDG
EGTETELTDERYAELAAREQMLLTVSEFGYGKRSSSYEFRISGRGGKGIRATDPNKTAEI
GKLVAAFPVEAQDQIMLVSNGGQLIRIPIEGIRIAGRSTKGVTIFNTAKGEKVVSVERIS
DPEDDANQLDNDSEKHSGTVDVS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcttactacacaatcagaacatgatgggctaaccggtattaaaccagttagt
attattgaggaaatgcaacgctcttatctcgattatgcaatgagtgttattgtatcgcgt
gcattacccgatgtgcgtgatggtcttaaacctgttcatcgacgtattcttcatgcgatg
aatggaatgggtctttcttttaatagatcttatcgtaagtcggcaggtgttgttggtgaa
gttatggggaagtttcaccctcatggtgattcttcaatttacgatgcattagtgcgtatg
gcacaggatttttccctgcgaaatcctctgattgatggacagggaaattttggttctgtt
gatggtgatcctcccgcagcaatgcgttatacagaatgtcgtttagaaaaagttgcggaa
gaacttttagctgatatcgataaagagacagttgattttcaggataattatgatggacgt
gagcgtgagcctgttgttttaccggcacgttttcctaatcttttagtcaatggatcgggt
gggattgctgtaggaatggcgacgaatattcccccacataatcttggtgaagtcattgat
gcatgtgttgctttaattgataatcctactataacgcttgatgaaataattgaaattatt
cctggtccggattttcctactggtggtattattcttggtcgttcaggtattcgttcagct
tatgaaacgggacgtggttcaattattatgcgggctaaggttaatattgaagaaattcgc
aataatcgacaggcaattattgtaagcgaaataccttatcagattaataaagcaacgatg
attgagaagatagctgaattggtgcgtgataaacgcatcgaaggaatctctgatctacgt
gatgaatctgaccgagatgggtatcgggttgttattgaacttaagagagaagcagttgcg
gatattgttttaaatcaactctaccattatacaccattacaaacgtcttttagctgtaat
atggttgcattgaatgggggaaagcctgagcaaatgacgttgcttgatatgcttcgtgct
tttatttcttttcgcgaagaagtggtaagtcggcgaacaaaatatcttttgcgtaaagca
cgtgaacgtgcgcatgttttagttggtcttgctattgctgttgccaatattgatgaaatt
atagcgttgattcgcaaggcacctgatcctcagacggcgcgtatacaattaatggagcga
cgttggttagccgctgatgtggcatctttaattaagcttattgatgatcctcgtcatgtt
gtccatgagaataaaacatataatttatctgaagaacaagctagagctattctggaatta
cgtttacaaagacttactgcacttggacgtgatgaaattgctgatgagttgaataaaatt
gcggtagatattacagaatatcttcatattttggcatcacgtttacggattatgggcatt
gttaaggatgaactaagctctcttcgcgaagaatttgcaactcctcgacgcactatcttt
ggttttggtaatactgagatggataatgaagatctaattgtgccagaagatatggtggta
acggttagccacaatggttatattaaacgtgtacctctgaatacatatcgtgctcagcgt
cgtggggggaaagggcgttctggtatgtccacaaaggacgaggattttgtaactcgttta
tttgtgagtaatacacatacacctgttcttttcttttcatcacgtgggattgtttataaa
gaaaaagtttggcgtttacctattggtacaccgcagtcgcgtgggcgcgctttagtcaat
atgcttcctttacaggagggagaacgtataacaacaattatgccattgccggaagatgaa
gcaagttggagcaaattagatgttatgtttgcaacaacacgtggaacggtacgccggaat
aaattatcagactttgttcaggtaaatcgtaatggtaaaattgccatgaaacttgatgag
gaaggagatgaaattttatctgtagaaacttgtacagagcatgatgacgtcgttttgaca
acagccaatgggcaatgtattcgttttccagttattgatgttcgtgtttttgcgggtcgt
aattcgctaggggtacgtggtatcaatatggttgatggtgatagggttatttctatgact
atcttagagcatgttgaagcaacatcggttgagcgttctgtttatattaaacgtgcaatt
aatgagcgacgtgctgctggtgcggatgcggaagatgttgtaattgttgatgaagatgga
gaaggaacagaaacagaactaacagatgagcgttatgcagagcttgctgctcgtgagcaa
atgcttttaacagttagtgaatttgggtatggaaagcgatcttcttcttatgaatttcgt
atttcagggcgcggtggaaaaggaattcgtgcaaccgatccaaataaaactgctgaaatc
ggcaagttagtagcagcttttccagtagaagcgcaagatcaaatcatgctagtttctaat
ggaggacagcttattcgaattccaattgagggtattcgtatagctggtcgttctacaaag
ggagtaacaattttcaatacagcaaagggtgaaaaagttgtatctgttgagcgtatttct
gatcctgaagatgatgcgaaccaattagataatgacagtgaaaaacattctggtacagtt
gatgttagttaa
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