Bartonella sp. JB63: BJB63x_008310
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Entry
BJB63x_008310 CDS
T05552
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
barj
Bartonella sp. JB63
Pathway
barj03420
Nucleotide excision repair
barj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
barj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJB63x_008310
03430 Mismatch repair
BJB63x_008310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barj03400
]
BJB63x_008310
Enzymes [BR:
barj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJB63x_008310
DNA repair and recombination proteins [BR:
barj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJB63x_008310
MMR (mismatch excision repair)
Other MMR factors
BJB63x_008310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
ORC5_C
PcrA_UvrD_tudor
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AQX29503
UniProt:
A0AAC9QPZ1
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All DBs
Position
912030..914483
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AA seq
817 aa
AA seq
DB search
MSDFSDHITSLKNDVSSYKPESNSSLVIRTLTERRKTQHEPEYLEKLNPEQKQAVINTEG
PILVLAGAGTGKTRVLTTRISHILHLGLAHPKQILAVTFTNKSAQEMKMRIGELIGKTVE
GMPWLGTFHSTGVKILRRYAELVDLKSNFTILDRDDVIRLLKQLIQAEGLDDKRWPARNL
AIMIDSWKNQGLSPNYISDGDSYSFGNGMGRKLYRNYQDRLKSLNACDFGDLLLHPISIF
QHNRDILREYHEKFRYILVDEYQDTNTAQYLWLRLLAQRREKKQVNLCCVGDDDQSIYGW
RGAKVDNILRFEKDFPPARIIRLERNYRSTSHILKTAAHLISHNHDRLGKTLFSDQTNSD
DAKVKIHTAWDSEEEARAISKEIEQAQQDGHSLNHIAILVRASFQMREFEDRFVTLGLNY
RVIGGPRFYERMEIRDALAYLRVVVQPSDDLAFERIINTPKRGLGDATLRYLYDSARARS
IPLFVAATELIETDELKPKIRNALRDVVENFRHWQSMLQHTPHAELAETILDDSGYTTMW
QEDRSPEAPTRLENLKEMIRSMEKFENLPSFLEHVSLVMDSESNENMDAINIMTLHSAKG
LEFETVFLPGWEEGLFPHQRSLDEGGRSALEEERRLAYVGLTRAKKYLHIWCVSNRRIHG
LWQSTLPSRFLNELPEEHIEVTEIETSYGGYSQIRFKGQNPFYNNYSTSEWKRSQKNKTE
VTRNNWEKQPSAQAEQIGYGDINSNIGVTRNHQRKNIKGKIIAKSASDKPSAFSINDRIF
HIKFGYGQISVIDGNKLTILFDKAGEKRVLDNFVTKA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttttccgatcatataacatctttaaaaaatgatgtctcttcttataagcct
gaaagtaattctagcttagttattcgtactttaacagaaagaagaaaaacgcaacacgaa
cctgaatatttagaaaagcttaatccagaacagaaacaagctgtcataaacacagaaggc
cctattttagttcttgcaggtgctgggactggaaaaactcgtgttcttactactcgtatt
tctcatattttacatctgggtcttgctcatcctaagcaaatattggccgttacttttact
aataaatctgcacaagaaatgaaaatgcgtattggtgaacttatcggtaaaactgttgaa
ggtatgccttggcttggaacatttcattctactggtgtaaagattttacgccgctatgca
gaacttgttgacttaaaaagcaactttacaattcttgatcgtgatgacgttattcgtctt
ttaaaacagctcattcaagccgaaggattagatgataaacgttggccagcacgcaactta
gcaataatgattgattcttggaaaaatcaagggctttcgccaaactatatatcagacggg
gattcttattcttttggaaatggcatggggagaaaactttatcgcaattatcaagatcga
ctaaaaagtcttaatgcttgtgattttggtgatcttttgctacatcctatttccatcttt
caacataaccgagatattcttcgcgaatatcatgaaaaattccgctatattcttgtagat
gaatatcaagatacaaatacagcacaatatctctggctccgtcttctagctcaacgccgc
gaaaaaaaacaagttaacctttgttgtgtaggagatgatgatcaatctatttatggatgg
cgtggtgcaaaagttgataatatactgcgttttgaaaaagactttcctcctgcaagaatt
atccgtctagaacgcaattaccgatctacatcacatattttaaaaactgctgctcatctt
atttctcataatcatgataggcttggaaaaacacttttttctgatcaaacaaatagtgac
gatgcaaaagtgaaaattcatactgcatgggattcagaagaagaagctcgcgccatcagc
aaagaaattgaacaagcacaacaggatggacactcgttaaatcatatagccatattagtg
cgagcatcatttcaaatgcgtgaatttgaagaccgctttgttacgcttggtcttaactat
cgtgttattggtggtccacgcttttatgaacgaatggaaatacgtgatgctttggcttac
ttacgtgttgttgttcaaccatctgatgatctagcttttgaacgtattatcaataccccc
aaacgcggtttaggagatgcaacacttcgttacctttatgatagtgcccgtgcacgctct
attccactctttgttgccgccaccgaattaattgaaacggatgagctaaaaccaaaaata
cgcaatgctttgcgagatgttgtggaaaacttccgccactggcaaagtatgctacaacac
acaccacatgcagaacttgctgaaacaattcttgatgattcaggttatacaacaatgtgg
caagaagatcgttcaccagaagcgccaacacgattagaaaatcttaaagaaatgatccgt
tctatggaaaaatttgagaatcttcctagttttttagaacatgtttcactggttatggat
tctgaaagcaatgaaaatatggatgcaattaatatcatgacgcttcattccgctaagggg
cttgaatttgaaacagtttttctccctggttgggaagaaggtctctttcctcatcagcgc
tcattagatgaaggtggccgttcagcattagaagaagaacgacggcttgcttacgtagga
ctaacaagagcaaaaaaatacttgcacatatggtgtgtatccaatcgaaggattcatgga
ctttggcaatctacacttccctcccgtttcctcaatgaattaccggaagaacatatagaa
gtaacagagattgaaacatcttatggtggttatagtcaaatccgcttcaaaggtcaaaac
cctttttataacaattattcaacatcagaatggaaacgttctcagaaaaataaaacggag
gtaacgcgtaataattgggaaaaacaaccatctgctcaggctgagcaaattggttatggt
gacattaattcaaatattggagtgaccagaaaccaccaacgaaaaaatattaaaggaaag
atcattgcgaaatcagcttctgataaaccatcagctttctctataaatgatcggattttt
catataaaatttggttatggtcaaatttcagtaatagatggcaacaaattaactatcttg
ttcgataaagccggagagaagcgtgttcttgataattttgtaacaaaagcttag
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