Bartonella sp. JB63: BJB63x_012070
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Entry
BJB63x_012070 CDS
T05552
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
barj
Bartonella sp. JB63
Pathway
barj03030
DNA replication
barj03430
Mismatch repair
barj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
barj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJB63x_012070
03430 Mismatch repair
BJB63x_012070
03440 Homologous recombination
BJB63x_012070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
barj03032
]
BJB63x_012070
03400 DNA repair and recombination proteins [BR:
barj03400
]
BJB63x_012070
Enzymes [BR:
barj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJB63x_012070
DNA replication proteins [BR:
barj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJB63x_012070
DNA repair and recombination proteins [BR:
barj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJB63x_012070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
DUF5104
Motif
Other DBs
NCBI-ProteinID:
AQX29858
UniProt:
A0AAC9QQP5
LinkDB
All DBs
Position
1358171..1358908
Genome browser
AA seq
245 aa
AA seq
DB search
MILKREKVRAMREIIFDTETTGLNKKSDRIIEIGCIEMVNRYLTGRRFHVYLNPQEVVIP
DEVVAIHGLTNERLKNEKKFDDIVDELLDFIDGAMVVAHNANFDIGFLNAELERVNKPLI
NINNVVDTLAMAKRRFPMGPNSLDVLCKRFGIDNSHRVFHGALLDAEILADVYIELIGGK
QGIFGFDNCESFDAMNVQDGKNVFHTIKIRSQTLPQRLSKQEKDMHANLIKSIGDKALWN
YFKII
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgattcttaaaagagaaaaagttagagcaatgcgtgagattatttttgatactgaaaca
acaggattaaataaaaaaagtgatcgcataattgaaatcggttgtatcgaaatggtcaac
cgttatcttacaggacgtcgattccatgtttatttaaatccacaagaagttgttattcct
gatgaggttgttgctattcatggattaacgaatgaacgcttaaaaaatgaaaaaaaattt
gatgatatcgtcgatgagcttttggattttattgatggagcaatggtagttgctcataat
gcaaattttgatattggttttcttaatgcagaattggagcgagttaataaacctcttatc
aatattaataatgtcgttgatacattggctatggcaaaacgcagatttcctatgggacct
aattctcttgatgtcttatgtaaacgttttggaatcgataatagtcatcgtgtatttcat
ggagctctacttgatgcagaaattcttgctgatgtgtacattgagttaattggtggaaaa
cagggaatatttggttttgataactgtgaaagttttgatgctatgaatgttcaagatggc
aagaatgtttttcatacaattaaaattcgctctcaaactttacctcaaagattaagtaaa
caggaaaaagatatgcatgctaatttaatcaaaagtataggtgataaagctttatggaat
tactttaaaattatttaa
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