Bartonella sp. JB63: BJB63x_012270
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Entry
BJB63x_012270 CDS
T05552
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
barj
Bartonella sp. JB63
Brite
KEGG Orthology (KO) [BR:
barj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barj03400
]
BJB63x_012270
Enzymes [BR:
barj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJB63x_012270
DNA repair and recombination proteins [BR:
barj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BJB63x_012270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AQX29878
UniProt:
A0AAC9QQM0
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All DBs
Position
complement(1382013..1385129)
Genome browser
AA seq
1038 aa
AA seq
DB search
MTRKPRVFSISPGTPFLPHFVDALLSGILIDNFASNGNIQATLADTLIYVPTRRAARALR
TAFFEKSHMQSSFLPTICPLGDINEESCLFIESNTNTLINTPPIGESERLLLLARLIRLW
RENLPTHLQSMFGTEDVFIPATTADAIWLAQDLACLMDEMETESVDWSRLKEIVPDMVAE
WWQITLDFLTIVTQSWPQILKERQKSNPVEWRNQAFKMHADILHRTQPHKPIIAAGVTSS
IPTIANFLKVIACLPKGAVILPGLDLQMDETQWDALGAFNKEKTIFDPSHHTAAFSHPQY
HLKKLLSLMKCQRIHVREIGQKSAIKIRRAALLSEALRPASTTDLWAQIVRDDYEDICAD
WSLIEAPNEREEALAISIALRNAIEDPKKTAALITNDRNLARRVSAELQRFGIEANDSGE
IPLAQTLPSTLLRLLLENIFKPGDPIAFLSLLKHPLTTLEYNRNYLREMAENFELLVLRG
NASRINLCECDQFFKTWMKTHSHKISNNCTLYLQKIEEADFLCHLLVKAVEPLVSLIKQD
RECTINEAAIATVEVFENFGRDVDNSLEHLYQNEAGKALVTFLRELVSDQSGLKFRLHEW
PALFSALMATRSVSPSPGGHPRLFIWGTLESRLQTVNTVVIGSLNEGSWPIKTHNDAFLS
RPMKMTLTLEPPEQRIGLSAHDFQWAMGMDKVIMSRATRVNHTPSVPSRWLQRLETVVGK
QVWKQICTRGEILLHWAKMLDNTNSITASERPCPVPPLDIRPRHFSVTEIEILRHDPYAI
YAKKILRLKPLKALIHDPCSAELGTLYHTILAVFCTQIKNQNATDMLDILLTIGRKEFDK
LNLPPDIEAIWWLNFENFAPFLIQWEQSLGSRKRHAEVIAQNTLIGETGVTLSGRADRID
ILSDKTVEIIDFKTSIPPSSTQVINLFSPQLALETALLIQGAFIDFKDLTPSNLLYIPLK
RKGEIKPIAIINKKDQQNAISLGKKAWKHLISLINYYQNPQQGYLSHAVPFKKSYESDYD
HLARLLEWSIGFDKADQS
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtaaacctcgtgtattttctatttctcccggaactccctttttgcctcatttt
gttgatgccctcctttctggaattcttattgataactttgcatcaaatgggaatatccaa
gctactcttgctgatactcttatttatgtaccaacacgccgcgctgctcgtgctttacgt
acagctttttttgaaaaaagccatatgcagtctagctttttgccaactatatgtccttta
ggggatataaatgaagaaagttgcctttttattgaaagtaatacaaatactctaatcaat
actccccctattggagaaagtgaacgtcttcttcttttagcgcgtctcatccgcctttgg
cgtgaaaatttgcctactcatctacaatctatgtttggcacagaagatgtttttattcct
gctactactgctgatgcaatctggcttgcacaagatttagcatgcttgatggatgaaatg
gaaacagaatctgtagattggtcaagacttaaagaaattgtacccgatatggttgccgaa
tggtggcaaataaccttagattttctcactattgtgacacaaagctggccacaaatttta
aaagaaagacaaaaatctaatcctgttgaatggcgtaatcaagcatttaaaatgcatgca
gatattttacaccgcacacaacctcataaacctattatcgctgctggtgtaacaagttcc
attcctacaattgcaaattttttaaaggtaattgcctgcttaccaaaaggagctgtcatt
cttccaggccttgatcttcaaatggatgaaacacaatgggatgccttaggtgcatttaat
aaagaaaaaacaatctttgatccttctcaccatactgctgcttttagccatcctcaatat
catttaaaaaagcttttatctctaatgaaatgccaacgcattcatgtccgcgaaattggt
caaaaaagtgctataaaaattcgacgtgctgctcttttatcagaagcgctgcgaccagcc
tctacgacagatttatgggcacaaatcgtacgtgatgattatgaagatatttgcgcagat
tggtcattaattgaggctcctaatgagcgtgaagaagctttagctatttctattgcttta
cgaaacgctattgaagaccctaaaaaaactgcagctcttattacaaatgaccgcaactta
gcccgtcgtgtatcagctgaattacaaagattcggaattgaagcaaatgattcaggtgaa
ataccacttgcgcaaacattaccttcaaccctattacgacttcttttagaaaatattttt
aaacctggcgatcccattgcttttctttctcttctcaagcatccactcacaacattggaa
tacaatcgtaattatttgcgtgagatggctgagaattttgaattacttgtccttcgaggg
aacgccagtcgtattaatctttgtgaatgtgaccaattttttaaaacatggatgaaaaca
cattctcataaaatttctaataattgtaccctttatttacaaaaaattgaagaagcagat
tttctttgtcatcttttagtcaaagcagttgaaccgttagtgtctttgataaaacaagat
agagaatgcaccatcaatgaagccgctatagcaactgttgaagtttttgaaaattttggt
cgtgatgttgataattctcttgaacatctctatcaaaatgaggcaggcaaagctttagta
acttttttgcgtgaattggttagtgatcaatcaggattaaaatttcgtcttcacgaatgg
cctgctctgttttcagctcttatggctacccgttctgtaagtccttcccctggaggacat
ccgcgtttattcatctggggaactttggaatcgcgtttgcaaaccgttaatacagtggtt
attggtagcttgaatgagggatcatggccgataaaaactcacaatgatgcttttttatcg
cgaccaatgaaaatgactttaactcttgaaccaccagaacagcgtattggcctttccgca
catgattttcaatgggctatgggaatggataaagtgataatgagtcgagccacacgtgtt
aatcatactccttctgttccctcacgttggttacagcgtttagaaacggttgtaggcaaa
caagtttggaaacaaatctgcacacgaggagaaatattactgcattgggcaaaaatgctg
gataacacaaacagcatcaccgcttcagaacgaccttgccctgtgccaccacttgatata
cgtccacgccacttttcagtaaccgaaatagaaatattacgacatgatccttatgccatt
tatgcaaaaaaaatcttacgactcaaaccacttaaagcactcattcatgacccttgctct
gccgagcttggaacactttatcatactattcttgctgttttttgcacacaaataaaaaat
caaaacgccaccgatatgctggatatattgctgactattggacgtaaagaatttgataaa
ttaaatttacctcctgatattgaagcaatttggtggctaaattttgaaaattttgctcct
tttttgattcaatgggaacagagccttggatcacgaaaacgacatgctgaagtcattgct
caaaacacactgataggagaaacaggagtaactctttcaggacgagctgatcgtattgat
attttgtcagataaaacagttgaaatcattgattttaaaactagtatccctccttcatct
acacaggttatcaacttattttctccacaattagctttagaaacagctttattaattcaa
ggagcttttatagacttcaaagatctcactccttcaaatttactttacattcccttaaaa
agaaaaggtgaaattaagcccatagccattataaataaaaaggatcaacaaaatgcaatc
tctcttggtaaaaaagcatggaaacaccttatctcactgataaattattatcaaaatcca
caacaaggctatctttcacatgcagttccttttaaaaaatcttatgaaagtgactatgac
catttagcgcgattattggaatggtctattggtttcgataaagcagatcaatcatga
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