Babylonia areolata (ivory shell): 143274855
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Entry
143274855 CDS
T11321
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03410
Base excision repair
barl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
143274855
03450 Non-homologous end-joining
143274855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barl03400
]
143274855
Enzymes [BR:
barl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
143274855
DNA repair and recombination proteins [BR:
barl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
143274855
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
143274855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
NTP_transf_2
BRCT_2
PTCB-BRCT
LIG3_BRCT
ZMYND11_CC
Motif
Other DBs
NCBI-GeneID:
143274855
NCBI-ProteinID:
XP_076434932
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All DBs
Position
2:51912196..51925544
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AA seq
577 aa
AA seq
DB search
MASQKRKGDDMHNISVKRSKGSKPKVDCSTKSGTQFFEGFVFYILPAGIQKARLQLFRSH
LQNHGGCLKDSVTNEVTHIIVDDEMSSERMCRIMKVDTPPTDRVILKTAWLSACLRQKAV
ATAEDFLLPISVSCKRKGSDNDDTTSSTAWNKNQTRTKEIEKEDTPPRPEQQFPKVGVMW
NAFKSKSKGEESEETDSDYVPSDDEASDDRVVSTNGPSTSSADTTPSTSPEKRSVPVGKW
ICAQSSKAPKRNLNEHITAKLEEMVKTYESTNDKWRAFGYQKAIAALRRYPKQITSWEEA
RSLQGVGSKLADKIWEIAQSGELRKLNEFQSSEQVRVLKLFTDVWGAGPTTANAWYQQGF
RTLDDLKTKANLTHQQKVGVRLYDDLLDRMPREEAAEIERVVREAAEWIQPGIIAQACGS
YRRGKKDCGDVDVLLTHPDGRSEKGLFGKLIQHLKDTGFLTDDLVSVEDDGNQKKYLGVC
KLPGEDRKHRRLDIIVVPYEEYACALVYFTGSAHFNRSLRHLCKKMGMSLNEHALRKGVV
RKGQEKIYEGTIVPTPTEESVLAALGVPFRPPEERDH
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaaaagcggaaaggtgatgatatgcacaatatttcagtaaaaaggtccaaa
ggatcaaaaccgaaagtcgattgctccacaaagtccggaacacaattttttgaaggcttt
gtgttctacattttaccagccggaattcagaaggctcgtctacagctgttcagatcacac
ctgcaaaaccatggaggatgtctgaaagattcagttacgaacgaagtcacccatattatt
gtagacgatgaaatgtcatcagagagaatgtgcagaataatgaaagttgacactcctccg
actgacagagttattttgaaaactgcatggctgagtgcctgtttgcgacaaaaagcagtt
gcaaccgcagaagattttcttcttcccatctcagtttcctgtaaaaggaaagggtcagac
aatgatgacactaccagctcaacagcttggaacaaaaatcaaacaagaactaaagaaatt
gaaaaagaagacacaccaccaaggccggaacaacagtttcccaaagttggtgtcatgtgg
aatgctttcaagtcaaaatccaaaggagaagagtcagaagaaacagacagcgactatgtt
ccgagtgacgacgaagcatcagatgaccgtgtggtttccaccaatggaccctcgaccagc
tctgcagacacgacaccaagcacatcaccagagaaaagatcagtgcctgtgggaaaatgg
atttgtgctcagtcatccaaggctccaaaaagaaacttgaatgagcacatcactgccaaa
ctggaggagatggtgaagacatatgagagtaccaatgacaagtggcgagcatttgggtac
cagaaagccattgctgctttgagaagataccccaaacagatcactagttgggaggaggcg
cggtctcttcaaggtgtgggaagcaagctggcggacaagatctgggagattgcacagagc
ggtgagctgcgcaagttgaacgagttccagtccagcgagcaggtccgtgtgctcaaactg
ttcaccgacgtgtggggggcaggccccaccacagccaacgcctggtaccagcagggtttc
cggacacttgacgacctgaaaactaaagccaacctgacccaccaacagaaagtgggagtt
cgcctgtatgacgatctgttggatcgcatgcctagggaagaggcagccgagattgaaaga
gttgtgagagaggcggcggagtggatccagccaggaatcatcgctcaagcatgcgggtca
taccggagggggaagaaggactgtggggacgtggacgttctgctcacgcaccctgatggc
cgctcagagaaaggcctgtttgggaagctcatacaacacctgaaagatacaggatttttg
acggatgacttggtgtctgtggaagatgacggcaaccagaaaaaataccttggagtctgc
aagcttccaggagaggacagaaaacatcgccgactggacatcatcgttgtgccctatgag
gaatacgcttgtgccttggtctacttcaccgggtctgcccatttcaacagatccctgcgc
cacctatgcaagaaaatgggcatgtcccttaatgagcatgcactgagaaaaggtgttgtg
agaaagggtcaagagaagatctacgagggcaccatcgttcccacgcccacagaagagtct
gtcctggcggctctgggtgttcccttcagaccaccagaggagagagatcattag
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