Babylonia areolata (ivory shell): 143275037
Help
Entry
143275037 CDS
T11321
Name
(RefSeq) uncharacterized protein LOC143275037
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143275037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
barl03041
]
143275037
Enzymes [BR:
barl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
143275037
Spliceosome [BR:
barl03041
]
Complex C
Other components
Step II factors
143275037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_DEAH11
Helicase_C
IBR
OB_NTP_bind
DEAD
IBR_1
RRM_1
RRM_DEAH11
WHD_HA2
IBR_2
Rcat_RNF216
NAT10_TcmA_helicase
AAA_22
AAA_19
HA2_C
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
143275037
NCBI-ProteinID:
XP_076435215
LinkDB
All DBs
Position
29:complement(26055800..26150339)
Genome browser
AA seq
1978 aa
AA seq
DB search
MADFKTFIVKRSRPQSDSDRYEIKALKAFLGLSPDLSSDCSANSSTDFSSEYFALGKCPS
TASLFPSKVKMAHPTKSVTKQEKRRDTHSTEKRDGQVCSFLDQEKIHRVVRTCQSRTTLQ
DCQHQDENGICLSSDRKEPTIARSLKSEMSSQQSCYASLQTLQGTGMAYRGNSYGKVRKE
QPITTPDELRENAPQKHLPGRGQGCRDTHDHTSGRQEMTQSKEKDDIRLEHKTKDDPQKK
KERGQGQEITQGLKERRELSENASRNVPQQETPLRCNSTGARQKDSRRSTPQAAGPPHSK
DTNSTMNTVFLRIHDTITDMKILGDMLTARVNTADVELTPTETSIKYRDQFTYCSLTCDD
SDDAKKLKELILKNRRQLKPLIDCSFHDYQKKEKQLDDQYHSTKQQQSQFDGKEMLKKDV
LCEIDSMSEQVLLKHKQTTNEAEKKIETSKSKLGNIYIRNETLTEIAALESKLEELQKQK
VEFNTATEGFRKKLISLLENESYVADVKFLRKQLGVECSRLERALPMYARRQDILQLIQK
NCISVLLAETGSGKSTQIVQYLLEAGYGEHGMIVCTQPRKVAVINLATRVAEELACSVGQ
KVGFKAGVRVRTSSSTKILYMTDHALLNECLTDPDLKIFSCIVVDEAHERSLYTDLLLTM
IKRCMRRRPDLKVIITSATIDPEVFINFFGICPVMQVSGRAFPVDVEWEDSASEENEFEN
YVDAAVNKVIEIHRKEPPGSGDILVFLTSAAEIQKCCDMTQKRLNDCTDFKCLPLHGQLQ
FEDQQKVFKSLEGNVRKIVFATNCAETSITIDGIKYVVDTGVAKEMVYDAKKKVNSLVVT
NISQSSAEQRKGRAGRTAPGKCYRLYSKQSYHTMDKISLPEILKIHLGQALLKLAELGFT
PDMYDFVQSPGQDAIEAALKTLHQLGALDDNVITDTGRWIARLPFDPKLGLMTLYGHKHG
LLYDTIVLASLMSSGNGLFFRGTSDKDHGKLDKAKLKFSHEGGDGLTSLEVYKAWQAVDE
RQKTKWCMDNSINVKAIRGVKDSVDEIIQILRKDSDTEIIQQFSDAQDTPDKLRKMIFHC
NVSNLCHYLGKERAGYFAAQASRQVHFHPSSTMCFLASHPQWVIYDQLLKTSRDFITGIT
PVDDAWLQEMNMQLYGFDVEQVRQKKLDVVFTQPAGSHAFFAMVGPRYTKLRRYEKQCCV
GNSDDIVIIESSREVGELKVFSTGTAKAVEQLRKMLTEVVSEAINKVQQEVQELTIGSEE
SGLRVILGQGGQLADILMPHETRKVYITNASDDLTLELVREKFQEFGDICYIHQFPSGKN
WGFVIYKTSAQATQAAESTMYDASNVAELERRRVAKHQAEFKAKLSWCRRPCNGTAFIDI
SPAYMSLFLQVHDLVIGHNLITVKMNKKRPDDSLFLRGLPAEVSEDLIRRSLLHALRYSE
NKEGIISKVCLLREKVGITDKNDLNQLQDHLKGIFQRQLKMSTVEIKVRPPRGEHDTKFS
AEAYFTDPIEGFNACRDLQRRLCIKNAMVDIEPIVSANLQVQRLVFEACKGELDKLKADK
LNDIEMNIEKQGSESLLLHLKADDMQSLVQARTFINEVIKGDVLDCNAAPALKHLMTPAG
RKMIKEAEGCTFAYVCLDSRTQRLAIHGTVMACTKMRLKINEYLDQVEKGTVEEVTLRGS
DRPPGLLKALIIKYDDDLDSLRLEAGLYCITINYHWHKLKLTGTPEGIAKARGMVEEVSM
TLMEANQQDVDKEDSISCVACFCPIDTNDLYRLEACAHPYCKDCVKHQVSVAVKDHHLPV
ICCQEGCQVPLSWRDFNSLSRLGHLKLPDLASSALSAYIMANRDKACFCTTPNCPMVYRL
TSEEDAKTFQCPECNMRVCTGCQAQAHEGVTCSMLRSSDKAKSGVEEWASEDRKNRRACP
GCNSPIEKDGGCNKMMCDACRTIFCWLCGKKYPTADACYKHLTLRHGGIFDINDLLYN
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttcaaaacattcattgtaaagaggtccagaccacagtcagacagtgaccgc
tatgaaatcaaggccttaaaagcattccttggtttgtctccagacctgtcttctgactgt
tcagctaactcaagtactgatttctcatcggaatattttgctttgggaaaatgtccctcc
actgcaagtttatttccatccaaagtgaagatggcccacccaactaaatctgtaacaaaa
caagaaaagagaagagatacacattcaacagagaagagagatggacaagtctgcagcttc
ctagatcaggagaaaatacatagggtggttaggacatgtcagtcaagaaccacacttcag
gactgtcagcatcaagatgagaatggcatctgcctctcttctgacagaaaggagcctacc
attgccagatcactgaagtcagaaatgtccagtcaacagtcatgttatgcatctttgcaa
actctgcagggaactgggatggcgtatagaggtaacagctatggaaaagttagaaaagaa
cagccaattacaactccagatgagctgagagaaaatgctcctcaaaaacatttgcctgga
agaggccaaggctgtagagacacacatgaccataccagtggaaggcaagaaatgactcaa
agcaaggaaaaggatgatatcagactagaacacaaaacaaaagatgatccacaaaagaag
aaagaaagaggacaaggccaggaaataacccaaggtctcaaggagaggagagaattgagt
gaaaatgccagcagaaacgttcctcagcaagaaacgcctctgagatgtaacagtactgga
gcaagacaaaaagacagcagaagaagcacacctcaagcagctggacctccacacagtaaa
gatacaaactctacaatgaacactgtgtttttaagaattcatgacaccatcacggacatg
aagattctgggtgatatgttaacagccagagtaaatacagcagatgtagaactgactccc
acagaaaccagtatcaaatacagggaccagtttacatattgctccctcacatgtgatgac
agtgatgatgcaaagaagcttaaagaactcattctgaagaatagaaggcagttaaaacca
ctgattgactgtagttttcatgactatcagaaaaaagaaaagcaacttgatgatcagtat
cacagtaccaaacagcaacaaagtcagtttgatggaaaagaaatgctgaagaaagacgtt
ctgtgtgaaattgacagcatgtcagagcaagttttgttaaagcacaaacaaaccacaaac
gaagctgagaagaagattgaaacaagcaaaagcaaactgggaaatatttatatccgtaat
gaaacccttacagagattgctgcgttggagagcaaattggaagaacttcagaaacagaag
gttgagttcaacacagctactgaaggcttcaggaaaaaactgatctcattacttgaaaat
gaaagttatgtggcagatgtgaaatttctgcgcaaacagttaggggtggagtgtagcagg
ctggagagagctcttcccatgtacgcccggcgccaggacatcctgcaactgatacagaag
aattgcatatcagttcttctggcagagacaggatctggaaagagcactcagatagtgcaa
tatctgctggaagcaggttatggtgaacatggcatgattgtttgcacacaacctcgtaaa
gttgcagttatcaacttggcaacacgcgttgctgaagagcttgcttgcagtgtaggccag
aaagtgggctttaaggctggtgttagagtcaggacatcatcttccaccaagattttgtac
atgacagaccatgcactgctcaatgaatgtctgacagaccctgacctcaagatattctcc
tgtattgttgtggatgaagcccatgagaggagtttatacactgatcttcttctaaccatg
atcaaaagatgcatgaggaggagacccgatttgaaggtcatcattacatctgccactatc
gatcccgaagtgttcatcaacttttttggcatttgccctgttatgcaagtgagtggcaga
gcatttcctgtggatgttgagtgggaagattctgccagtgaggaaaatgagtttgagaac
tatgttgatgctgctgttaacaaggtcatagagatacaccgtaaagagccccctggatct
ggagacatccttgtttttctcacttcagctgcagaaattcagaaatgctgtgacatgacc
cagaaaaggttgaatgactgcacagatttcaagtgtttgccacttcatggtcagctgcag
tttgaggatcagcagaaggtgttcaagtctctggaaggtaatgtgagaaagattgtattt
gctaccaactgtgctgaaacttcaatcaccattgatggtatcaagtatgttgtggacact
ggcgttgccaaagaaatggtctatgatgccaaaaagaaggtgaactctcttgttgtcact
aacattagtcagagctcagcagagcagcgaaaaggtcgggcaggacgcacagcccctggc
aagtgctacaggctatactccaagcaaagttaccacaccatggataagatcagtctgcca
gagattctcaagatccatctgggccaagctttattgaaacttgcagaactgggtttcaca
ccggacatgtatgactttgtgcagtcaccagggcaagacgccattgaggcagcattgaaa
acattgcatcagctgggtgctttggatgataatgtcatcactgacactggcagatggatt
gccaggttgccgtttgacccaaagcttggacttatgactttgtatggtcacaagcatgga
ttgttatatgacaccatagtcctggcatcccttatgagctctggcaatggtctgttcttc
cgtggcacttcagacaaagatcatggaaaacttgacaaggctaaattgaagttcagccat
gagggaggtgatggtctaacgtctctggaagtgtacaaggcatggcaagcagtggatgaa
cggcaaaaaaccaaatggtgcatggacaatagtattaatgtcaaggccattagaggggtg
aaagattcagttgatgagatcatccaaatcctcagaaaggattctgacacagagatcatt
cagcagttctctgatgctcaggatacccctgacaaactgcggaagatgatctttcattgc
aatgtttccaatctctgccattacctggggaaggagagagctggctactttgcagcccaa
gcttccagacaggtgcactttcacccttcttccaccatgtgcttcttggccagccacccc
cagtgggtgatatatgaccagctgttgaaaacatcacgtgattttatcacaggcatcaca
ccagtggatgatgcctggctccaagaaatgaacatgcagctgtatggatttgacgtggag
caagtcagacagaagaagctggatgttgtttttactcaaccagcaggatcccatgctttc
tttgctatggttggacctcggtacaccaagttgcgccgctatgaaaagcagtgttgtgta
ggcaactcagatgacattgtcatcattgaaagcagcagagaagtaggagaactgaaggtg
ttttcaactggcacagcaaaggcagtggaacagctgagaaagatgctgactgaggttgtc
agtgaggccatcaataaagtacagcaggaggtgcaagagctcaccataggatcagaagag
tcaggcctcagagtcattctgggccaggggggccagttagcagacatcctcatgcctcat
gaaaccaggaaggtctatatcaccaatgcctctgatgacctgacgctagagctagtcagg
gaaaagtttcaagagtttggtgacatctgttacattcaccagtttccttcaggaaagaat
tggggctttgtgatttacaaaacatcagctcaggctacacaggcagcagaaagtaccatg
tacgatgccagcaacgtggcagagttagaacgtcgtcgtgttgctaagcatcaggccgag
ttcaaagccaagctgtcttggtgccgtcgtccatgcaacggcacagcctttattgacatt
tccccagcttacatgtcactgtttctgcaagtccatgatcttgtcattggccataacttg
atcacagtcaaaatgaacaagaagagacctgatgacagtctgttcctgcgtggactccct
gcagaagtctctgaagatctgatcagacgttcactgctccatgcactgagatacagtgag
aacaaagaaggaattataagcaaagtttgtttgttgcgagagaaagttggtatcactgac
aagaatgacctgaatcaactgcaagaccatttgaaaggaatttttcaaaggcaactgaaa
atgtcaacagttgaaataaaagtgcggcctcccagaggagaacatgacacaaagttttcc
gcagaagcttacttcacagatcccattgaaggctttaatgcctgcagagatctacagaga
agactgtgtatcaaaaatgcaatggtggacattgagcccattgtctcagccaatctccaa
gttcaacgcctggtatttgaagcctgcaaaggggagcttgacaagcttaaggcagacaaa
ctgaatgacattgaaatgaacattgaaaagcaaggatcagaaagcttgcttttgcatctg
aaagcagatgatatgcaaagccttgtgcaggccaggaccttcatcaatgaggtcataaag
ggggatgttttggactgcaatgcggcacctgctctgaaacacttgatgactccagctgga
aggaagatgatcaaagaggcagaggggtgtacttttgcctatgtctgtcttgacagcagg
acccaaaggctagccatacatggaactgtgatggcctgtacaaagatgcgcttgaagatc
aatgagtacctggaccaggtggagaaaggtacggtggaggaagtgactctgagaggcagt
gacagacccccaggactgctgaaggctctcatcatcaagtatgatgacgacctagacagc
ttgcggctggaggcggggctgtattgcatcaccatcaattaccactggcacaagctgaag
ctaactggtacccctgaaggtattgccaaagccagggggatggtggaggaagtgagcatg
accttgatggaagctaatcagcaggatgtggacaaggaagacagcatcagctgcgtggca
tgcttttgccccatcgacaccaatgacctgtatcgtctggaggcctgtgcccacccctac
tgcaaagactgtgtcaaacatcaggtgagcgtggcagtgaaagaccatcacctgccagtt
atatgctgtcaggaaggctgtcaagtccctctgtcatggcgagatttcaactcactctcc
cgtcttggacacctcaaacttccagacctggcttcttcagccctctcagcttacatcatg
gccaaccgtgacaaagcttgcttctgcactacacccaactgtccaatggtgtatcgtctg
acaagcgaagaggatgccaagacctttcagtgtcctgagtgcaacatgcgtgtttgtaca
ggttgtcaggcacaggctcatgaaggtgttacctgcagcatgcttcgcagttctgacaaa
gccaagtctggggtggaggagtgggcgagtgaggacagaaagaaccgcagggcctgtcca
ggctgcaacagccccatagaaaaggatggaggctgcaataaaatgatgtgcgatgcctgc
cgaaccatcttctgctggctgtgtggaaagaagtatccaaccgctgatgcatgctacaaa
cacctgactcttaggcatggtggtatatttgacatcaatgatctcttgtataattaa
DBGET
integrated database retrieval system
