Babylonia areolata (ivory shell): 143276676
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Entry
143276676 CDS
T11321
Name
(RefSeq) uncharacterized protein LOC143276676
KO
K19719
collagen type II alpha
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl04512
ECM-receptor interaction
barl04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
143276676
04518 Integrin signaling
143276676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
barl00536
]
143276676
Glycosaminoglycan binding proteins [BR:
barl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
143276676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
NELL_VWC_C
Motif
Other DBs
NCBI-GeneID:
143276676
NCBI-ProteinID:
XP_076437421
LinkDB
All DBs
Position
32:complement(11606889..11745223)
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AA seq
1467 aa
AA seq
DB search
MKFCGSVRVLLLALITLVALSSAAPTVEEVGEIEEEGEICIYNGTEYAHGVTWSPTHPPC
LVCICKNADVHCNFQSDCDKQYESAELRTAALAETLNSLQGPRGIRGDAGYPGRQGDRGD
AGPDGTNGVPGPPGPPGPSEMTAEQAYQMYFARNYGDKSGAVYGPQYLQAQVGPMGPRGT
PGPPGAVGPQGMEGVRGPLGDTGDPGPPGNRGEAGPHGPPGIEGDTGRNGEPGSSGPPGT
KGPPGSPGPPGMPGMKGHRGFTGYGGSRGEPGPAGEMGETGPPGAIGGPGPAGPRGSPGE
RGPDGPPGQEGLRGVDGLSGQAGPPGPVGNTGPPGIPGMGGTKGDQGAPGPKGGPGPQGA
RGDNGLPGITGEAGMPGPAGLVGPPGEDGAAGDPGVPGPPGFPGPRGQPGLGGSPGMGGP
KGSHGQTGQPGYKGSMGEKGQTGPAGETGRRGLPGTQGRRGRRGQEGAPGAQGVQGERGL
PGARGLPGSPGLAGPKGEDGEPGPRGPRGESGNHGEVGRPGPPGVPGEAGPPGPPGPDGN
SGPPGEPGPTGSEGKAGEMGPPGPPGTQGPQGPQGPPGDRGPSGKDGNMGPPGSRGPPGD
MGSTGEMGPQGQPGPEGEIGERGHQGSPGPVGSQGPPGVPGPPGEAGRDGEMGAPGPVGV
PGGPGYPGERGFPGERGPQGPEGEPGGLGMEGPTGPDGPAGPAGEIGIPGDIGPQGPIGA
PGERGPPGPAGEKGEQGESGPTGPDGLPGRTGPQGERGPGGPQGITGPPASKGAPGDPGF
IGQKGPTGTPGPRGEPGVEGEQGYTGLQGQAGSPGPKGETGLMGLKGQQGEPGPPGEPGN
AGAPGQAGVMGRRGATGDRGIQGSPGDAGPAGRPGTQGPTGPPGLRGPSGSPGPRGIKGT
TGEAGPAGRPGSDGAPGVPGNPGPKGDRGEQGLSGVEGPTGPPGPQGQRGENGMPGVPGE
RGGPGPNGPPGAPGSPGKRGNDGFPGKQGDPGTPGPPGPSGSPGGHGPPGNNGAPGLQGT
AGHPGPVGEMGPPGPPGQTGPLGRSGPPGPPGPAGERGLPGEIGPEGPPGPSGSRGTPGP
QGPMGEAGEVGDDGERGDKGSRGLLGLDGVKGPVGPAGETGTAGPRGIPGSRGSAGPKGP
IGPDGEPGPEGPVGLPGPRGPAGEDGRRGPAGDPGESGQPGPPGQVVYSSAMTSWFQGAS
KGPGVQGDAPGKTRNTLVALKEVANEIEMLKKPSGTREAPGNTCRDIAVSDPSLKSGYYW
INPNGGSISDAIRVFCKMKGEKTQTCLEPTTGEYATQNWRFTAQEQGVWSFAGSFSEDPI
FDYGSHKSQVKMLQYHTNNGRQRLTVKCRDTIAVHDKANKDYSKAVTLTSFDEESMTARS
KRPFRYKVLKDGCQVKNGKEGETLLEVAGSKLLKRIPILDVGFVEQPEGDFGLTLGRACF
WTNAKGGKGKGKGKGKGKGKGKKKRRK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctgcggtagtgtaagggtactactactggctctcatcaccctcgttgctcta
tcttcggctgcccctactgttgaggaggttggagagatagaggaggaaggggagatttgt
atctacaacggcacggaatatgcacacggggtgacctggtcccctacacacccgccctgt
ctcgtctgtatctgcaagaatgctgacgtccattgcaacttccagtccgactgcgataag
caatatgagtctgctgaactgaggaccgcagcgttggcagagaccttgaactcactgcaa
ggaccacgtggtatccggggagacgctgggtaccctggtcgtcagggtgacaggggggat
gctggtcctgacggcaccaacggcgttcctggtcctcctggtcccccgggacccagtgaa
atgacggcagagcaagcctatcagatgtacttcgcacggaattacggcgataaatctggg
gctgtgtatggaccacagtatctacaagctcaagtgggacctatgggaccaagaggcact
cccggtccacctggagccgtcggccctcaaggaatggaaggggtgcgaggaccccttggt
gacactggtgatccgggccccccaggtaatcgtggcgaggctggccctcacggtccaccc
ggcattgagggagacacaggacgaaatggagaaccaggatcctccgggcctccgggcacc
aagggccccccagggtctcccggacccccaggcatgccgggaatgaagggtcaccgaggt
ttcacaggatacggtggttcaaggggagagcccggcccggccggagaaatgggagagact
ggaccccccggtgctataggaggccctggacccgcagggccccggggctcccctggagaa
agaggtcctgatggtccacctggtcaggagggtctgagaggtgtggatgggttgtccggg
caagcaggccctccgggacctgtcggaaacactggaccccctggtatacctggtatgggc
ggtaccaagggggaccaaggtgccccggggcccaaaggaggaccaggaccgcagggagcc
aggggagacaacggccttcccggcatcaccggtgaagcaggaatgccgggacccgcaggt
ttagttggccccccaggagaagacggagctgctggagacccgggagtacccggcccacca
ggattccccggccctagaggtcagcctgggttgggtggcagtcctggtatgggcggcccc
aaaggctctcatggtcagacaggtcagcccgggtacaagggttccatgggggagaaaggt
cagacaggacctgccggagaaacgggtagacgaggtttacccggcacccagggtcgtcgg
ggtcggagaggtcaggagggagccccaggtgcccagggagttcaaggagagaggggtctt
cccggagcccgcggattgcctgggtccccaggactggctggtcccaagggagaggatggg
gagcccggtcctcgaggtcctcgcggagagtccggcaaccacggtgaggtgggacgacct
ggtccacctggagttcctggtgaagctggtcccccaggtccacctggtcctgatggaaac
agcggtccacctggcgaacccggtcccactgggtctgaaggcaaggccggagagatggga
cccccgggcccaccgggaacacagggcccacaaggcccacagggtccacctggggacaga
ggaccatcagggaaggacgggaacatgggaccacccgggtcccgcggtccacctggtgac
atgggctccactggagaaatggggccccaagggcagccgggaccagagggggagatcgga
gagcgtggacaccagggctcaccgggtcctgttggatcccagggcccacccggtgtcccc
gggcccccaggagaggcagggcgtgacggagagatgggtgcacccggtcctgtaggggta
cctggaggtccagggtacccgggagagcggggattccccggagagaggggacctcaggga
cctgagggtgagccaggcggtctaggcatggagggacctacaggacctgacggaccagcc
ggacctgctggtgaaattggaattccaggcgacatcggaccacaagggcctattggggca
ccgggagagcgaggacctccgggacctgccggggagaagggagaacagggggagtcaggg
cccacaggaccagacggacttccgggcaggaccggtccccagggagagcgtggtccgggc
ggtccccagggcatcacgggaccccccgcctctaaaggggcccccggcgatcctggcttc
ataggtcagaagggacccacgggtactccaggacccagaggagaacccggggtggaaggg
gagcaagggtacacgggtttgcagggccaggcaggctcgccaggacccaagggagaaaca
ggactgatgggactgaagggacaacaaggagaaccgggtcccccaggtgaacctggtaat
gctggagccccgggtcaggccggtgtgatgggcaggaggggggcgacaggtgaccggggc
atccagggctcgccaggtgacgccggcccggcaggcagacccgggacccagggacccaca
ggaccccccgggctgaggggaccctccggtagtcctggacctcgcggcatcaagggaacc
actggagaggcaggacctgcgggtagacccgggtcggacggtgcacccggggtgcctggc
aatcctggaccgaagggcgaccgtggggaacaaggcttgtcgggcgtggaaggtcccaca
ggaccgccgggccctcagggacagcgcggagagaacggcatgcccggtgtccccggagaa
agagggggccccgggccaaacggccccccaggcgcaccgggttccccgggcaagcgaggc
aacgacggattccctggaaagcagggtgatcccggcacccctggacctcctggtccttct
ggctcccccggtggtcacggacccccaggtaacaacggcgcccccggattgcaagggacc
gccgggcaccctggaccagtgggagagatgggaccacctggtcctcccggtcagaccggt
ccgctgggacgctccggtccgcctggtcctcctggaccggctggcgagcgtggactgccg
ggcgagatcggacccgagggaccaccaggacctagtggatctagaggcacgcctgggccg
caagggccgatgggagaggccggggaggtgggagacgacggtgagcgaggagacaagggg
tcccgtggacttctggggttggacggcgtgaaagggcctgtgggccccgcgggtgagacc
ggaactgcaggaccccgaggaataccaggaagcaggggatcggcaggacctaaaggcccc
attggaccagacggagagccgggtccggagggacccgttggtcttccgggacctagagga
ccggctggagaggacggtcgcagagggccagctggagaccctggtgagtcagggcagccg
ggccccccaggtcaggtggtctactccagcgccatgacctcctggttccagggcgcttcc
aagggcccgggagtacagggagatgctcctggaaagacacgcaacactctggtggctctg
aaggaagtcgccaatgagatcgagatgctgaagaaaccgtcgggtacccgcgaggcacca
gggaacacctgtcgagacattgccgtgtcagacccttccctcaagagcggctactactgg
atcaatcccaatggcggcagcatcagcgatgctattcgtgtcttctgcaagatgaagggg
gagaagacgcagacttgtctggaacctaccactggagagtatgctacacaaaactggcgg
ttcacagcccaggagcagggggtctggtcttttgcgggctccttctccgaggatcctatc
tttgactacgggagccacaagtcccaggtgaagatgctgcagtaccacacgaacaacggt
cgccaacggctgaccgtcaaatgcagggacaccatcgccgtccacgacaaggccaacaag
gactacagcaaggctgtcaccctgacgagctttgacgaggagagcatgaccgctcgtagc
aagcggcccttcagatacaaggttctgaaggacgggtgtcaggtgaagaacggcaaggag
ggagagaccctgctggaggtcgctgggtccaagctgctgaagcggatcccaatcctggat
gtgggcttcgtggagcagcccgagggtgacttcggcctgaccctgggccgtgcctgcttc
tggaccaacgccaagggcggcaagggcaaaggaaagggcaagggcaagggcaagggcaag
ggcaagaagaagaggagaaagtga
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