Babylonia areolata (ivory shell): 143279374
Help
Entry
143279374 CDS
T11321
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
143279374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barl03019
]
143279374
04121 Ubiquitin system [BR:
barl04121
]
143279374
03036 Chromosome and associated proteins [BR:
barl03036
]
143279374
03400 DNA repair and recombination proteins [BR:
barl03400
]
143279374
Messenger RNA biogenesis [BR:
barl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
143279374
Ubiquitin system [BR:
barl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
143279374
Chromosome and associated proteins [BR:
barl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
143279374
DNA repair and recombination proteins [BR:
barl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
143279374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_5
zf-RING_6
Ank_4
Ank_3
BRCT
Ank_KRIT1
BRCT_2
zf-C3HC4_3
RTT107_BRCT_5
zf-RING_5
Prok-RING_4
PTCB-BRCT
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
143279374
NCBI-ProteinID:
XP_076439519
LinkDB
All DBs
Position
2:26911368..26933901
Genome browser
AA seq
771 aa
AA seq
DB search
MEVDRAVSEFTATKHALASLQRLLLCCQCEQLTRNVCTLGNCEHFFCKQCVEERLGEGCP
VCDTPAHARDAQVNKQLSNIVSVSLELSRLMKQSLDFAVVEKGKDQEDEESSGTSLTPQD
DVPEEDTADPTSTNTYDQDVSAAKNKLQAPGSSEQHQEHSPQRVATRRDKRKKNSQTTLT
QVWDEQLSDEPDETGTRNDAYPQNGKNEKTSAPQTRTNKRQKYTSLQTRSGPCVEDPESL
TSVDETQTGRVDLTSEAGSSPACTNKQRRRPNQGCSSKATPKKTPEAKNASKGRFKTPTP
PRSGRRHSGALQSNGIISAPPTPNINEDGMKMNTSHALSSASRRRSAPVLPMQMEPGAGQ
ATPQKRRKTMSPRPSPVHRTKVPPPVGASPASKSGNRRSSDGITGRVKRNAKGETPLHVA
AIKGDITAVRELLNKGDNPNVRDNAGWTPLHEAVNHGHTAVTEALLQHGAMVNMPGMEND
TPLHDAVLNHRLDCVRLLVTYGASTTARNVHGQTALEVARTDDMRAALLQSAVQRPVVTT
LPEPEDAEEFRPLCFLGTALSRDQRGLLQKCATKLHAKVVEDYCPEVTHVVSSVNADGQC
PRTLKYLHAILGGKWIVSIDWVSVCLEYGQKVSEEPFEVPGSSTHPNSAAPSKARVNRKL
QLPGLFDGCQIYLHGSFTRLPPSRAELSELLHLGGARLLTREPRLANLDEYDITVPYHAE
PGSNIADCGVFIIHDGSSKAPAVHAQRMRSVPSSWVTECIATFSLPEPGGV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaccgagccgtgtctgagtttacggcaactaaacacgccctagcgtctttg
caacgccttctgctttgctgtcaatgtgaacagttaaccaggaatgtttgcacattaggc
aactgtgagcacttcttttgcaagcagtgtgtggaggagaggctgggggaggggtgccca
gtgtgtgacactccggcccatgcccgggacgcccaggtcaacaagcagctttcgaacata
gtctctgtgtcgctggagctcagccgcctgatgaagcagtcactggacttcgctgtcgtc
gagaaaggtaaggaccaggaagatgaggaatccagcggaacttcactgactccccaggac
gatgtcccagaagaggacactgccgaccctacaagcactaacacatatgaccaagatgtc
agcgctgcaaagaacaaactacaggctccaggctccagcgagcagcaccaggagcactca
ccacagagagtggcaacaagaagagacaagaggaagaaaaacagccagacaactctgact
caggtctgggatgagcagctctctgatgagccagatgaaaccggcacaagaaacgatgct
tatcctcaaaacgggaagaatgaaaaaacctcagctcctcagacaagaacaaacaagaga
caaaaatacaccagtctccaaacgaggagtgggccatgtgttgaagacccagagagtctg
acgtcagttgacgagacacagacaggcagagtggacctcaccagtgaagctggcagctcg
ccagcgtgcacaaacaaacagagaagaagaccgaatcagggttgttcaagtaaagcgacc
cctaagaaaacacctgaagcgaagaacgcatccaaggggcgtttcaaaacaccaactcca
ccacgctctgggagaagacacagcggagctctgcagtctaacggaatcatttcagctccc
ccaacacctaacatcaatgaggatggcatgaaaatgaacacatctcatgcgctgtcttca
gcttcaaggcgcaggtcagcgccggtgttaccgatgcagatggagccaggagcgggtcag
gctacacctcagaagagacgcaaaacgatgtctccgaggccttcacccgtgcacaggaca
aaggtaccgccacctgtgggtgccagtcctgcctccaagtctggcaacaggagatccagt
gatggcatcacaggcagggtgaagcgcaatgccaagggagaaactccactccacgtggct
gctataaagggtgacatcactgctgtgagagaactgttgaacaagggagacaatcctaac
gtccgcgacaacgctggctggactccattgcacgaagcggtgaaccacgggcacacggcg
gtgacggaggcactgctgcagcatggggccatggtgaacatgcccggcatggagaacgac
acgcccctgcacgacgctgtgctcaaccatcgtctggactgcgtgcggcttctggtcacg
tacggagcctccactacagccaggaacgtgcatggtcaaacagccctggaggtggcgagg
acggatgacatgagagctgccttgctgcagtcagccgttcagcgtcccgtggtcaccacc
ctgccggagcctgaagatgctgaggagttcagacctctgtgtttcctgggaacagccctg
agtcgagatcagcggggtttgcttcagaagtgtgccaccaagctgcacgccaaagtggtg
gaagactactgccctgaagtgacccatgtggtcagcagcgtgaacgcagacggtcagtgt
ccgcgcaccctgaagtatcttcacgcgatccttgggggcaagtggatcgtcagcatagat
tgggtcagcgtgtgtctggagtatggccagaaggtgtctgaagaaccctttgaagtgccg
gggagcagcacccaccccaactccgctgctcccagcaaagcccgcgtcaatcgtaaactg
cagctcccaggcctgtttgatggatgtcagatctacctgcacgggtccttcacccgtctg
ccgcccagcagagccgagctgtcagaactgctgcacctagggggcgctcgcctcctgaca
cgcgagccacgcctcgcaaacctggacgagtatgacatcactgtcccgtaccatgcagaa
cccggcagcaacatcgccgactgtggagtgttcatcattcacgatgggagcagcaaggca
ccggcggttcacgcccagagaatgcgttctgtgccgtcatcgtgggtcactgagtgcatc
gccacattctctttgccagagccaggcggcgtttaa
DBGET
integrated database retrieval system
