Babylonia areolata (ivory shell): 143280933
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Entry
143280933 CDS
T11321
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143280933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barl03019
]
143280933
03016 Transfer RNA biogenesis [BR:
barl03016
]
143280933
Enzymes [BR:
barl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
143280933
Messenger RNA biogenesis [BR:
barl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
143280933
Transfer RNA biogenesis [BR:
barl03016
]
Prokaryotic type
tRNA degradation factors
143280933
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
HopW1-1
KOW5_SPT5
Motif
Other DBs
NCBI-GeneID:
143280933
NCBI-ProteinID:
XP_076441837
LinkDB
All DBs
Position
4:19660380..19693223
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AA seq
763 aa
AA seq
DB search
MAAPIRLCRQCRKWLLKKSPYRVASVRQTHLGPWKDKNYGCEVEINVGDGQLQLSSGKLA
RFADGAAVAQLGETSVLVTAVSKQRYTPVSFLPLTVDFRQKAAAAGRIPMNFFRRELGAT
ETEILTSRMIDRSLRPMFPSGFFCDTQLVCNVLAMDGANDPDIVSINAASAALSVSDIPW
NGPVGAVRVGLVDKEVVINPTRKQLQRSTLDLIVTATQKQHVVMLEGVGEAVHLHDLQRA
ISTGVREVQSVVQGIAQLATALGRPKRVLEPLPALEAEVASSLRSMCSARVRDVLYNNSY
DKVSRDVAIQQIKADVIEKLKEAYPASDPSLMNDCFNSVTKEVFRSLILDEDRRCDGRGL
EQLRDISCKVDLFKPLHGSALFQRGQTQVLCTVTYDSPEAAARMDPVSVLTGNYREKNFM
LHYEFPPYATNETGRPGAVGRREFGHGALAEKGLRAVVPNNCPFTIRLTAEVLESNGSSS
MASVCGGSMALMDAGVKVKAPAAGVAMGLVTRTNADTGEISEYKILTDLLGIEDYMGDMD
FKMAGTKFGVTALQVDFKLPGVPLEIVSKSLEQGFAAKNDILDIMDQAISKPRDSIKSHG
PLIEKLEIKAQDRSKFFGIGGRNLRKLRSETGVTITPVDDVSFQLFAPNTEAMDEAREMI
EEFLTDEEPELEFGAIYTGRIVEVRDTGVMVELHPKLQPVLLHNSQLDQRKVQHPSALKL
EVGQEITVKYFGRDPVSGRMRISRKVLQAPATTVIRNLGSPRS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccattcgcttgtgcaggcagtgccgaaagtggctgttaaaaaagtctcca
tatcgagtggcaagcgtcaggcagacccacctcgggccatggaaagataaaaactatggc
tgcgaagttgaaatcaacgttggcgatggacaacttcagctaagctcaggaaaacttgcc
cgctttgcagatggagcagccgttgcacagcttggagaaacttcggttttggtcacagca
gtcagcaagcaaagatatacaccagtttcctttctacccctcacagttgacttccgacaa
aaggctgcagcggcaggtcgaataccaatgaacttcttcaggagagaacttggtgccaca
gaaacagaaatcttgaccagtcgaatgattgacagatctctgagacccatgtttccttct
ggtttcttctgtgatacacagctggtatgtaatgttttggccatggatggtgctaacgac
cctgatattgtcagtattaatgctgcgtctgctgctctgagtgtatcggacattccgtgg
aatggccctgtgggtgctgtgcgtgttggcctggtggacaaggaggtggtcatcaacccc
acgcgcaaacagctgcagcgcagcaccctggatctgattgtcacggcaacgcagaaacag
catgtagtgatgctggaaggggtgggcgaggcggtgcacctccacgacctgcagcgagcc
atcagcaccggggtcagggaggtgcagtccgtggtgcagggcattgcccagctggccact
gccctcggccgacccaagagggtgctggaacccctgcccgccctcgaggcagaggtggcc
agttctttgaggagtatgtgttctgccagagtgcgggacgtgctgtacaacaacagctat
gacaaggtgtccagggatgtcgcaatccagcagatcaaggctgatgtgattgagaagttg
aaagaggcttaccctgccagtgatccctctttgatgaatgactgtttcaactctgtgacg
aaagaagtgttccgcagcttgatcctggatgaagatcgtaggtgtgatggtcgagggttg
gaacagctccgtgacatcagctgcaaggtggacctgttcaaacccctgcatggttcagcg
ctcttccagcgaggacagacccaggtgctgtgcacagtgacgtacgacagtcctgaagct
gcggccaggatggaccctgtctccgttctcactgggaactacagggaaaagaacttcatg
ctgcattatgagttccctccctatgccactaacgagactggcagacccggagctgtagga
aggagagaatttggtcacggtgccctggcagagaaaggactgagagccgttgtgcccaac
aactgtcccttcaccatacgtctcactgctgaggtgctggagtccaatggatcatcatcc
atggcctccgtgtgtggaggcagcatggctttgatggacgccggggtcaaggtcaaagcc
cctgctgcaggcgtggccatgggtctggtgacccgaaccaatgctgataccggggagatc
tcagaatataagattctgactgacctgctgggcattgaggactacatgggggacatggac
ttcaagatggcagggaccaagtttggagtcacggctctgcaggtggatttcaagctgccg
ggggtgcctctggaaatcgtgtccaaatctctggaacaaggattcgctgcaaagaatgat
attttagacatcatggatcaggcgatctccaagccgagggacagcatcaagtcccatggt
ccactcattgaaaagttggagatcaaagcacaagacagatcaaagttctttggaattggt
ggtcgtaacttgagaaaactgcgcagtgaaacaggtgtgacaatcacacctgtggatgat
gtcagcttccagctgtttgctcccaacacagaagccatggatgaagcacgggagatgatt
gaagagtttctcacagatgaggaacctgagctggaatttggtgctatttacacaggcaga
attgtagaagttagagacacaggggtgatggtggagcttcatcccaaactgcagccagtt
ctgttgcacaactcacagctggatcaacgcaaggtgcagcaccccagtgccctgaagctg
gaggtgggacaggagatcacggtgaagtactttggccgagacccggtcagcggtcgcatg
aggatctcccgcaaagtgctgcaggccccagccaccactgtaatcaggaacctgggctct
ccccgatcatga
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