Babylonia areolata (ivory shell): 143281042
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Entry
143281042 CDS
T11321
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03008
Ribosome biogenesis in eukaryotes
barl03013
Nucleocytoplasmic transport
barl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143281042
03015 mRNA surveillance pathway
143281042
03008 Ribosome biogenesis in eukaryotes
143281042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barl03019
]
143281042
03009 Ribosome biogenesis [BR:
barl03009
]
143281042
Messenger RNA biogenesis [BR:
barl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143281042
mRNA cycle factors
Stress granule specific factors
143281042
Ribosome biogenesis [BR:
barl03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
143281042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
TAP_C
Tap-RNA_bind
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
143281042
NCBI-ProteinID:
XP_076442061
LinkDB
All DBs
Position
4:30805497..30839247
Genome browser
AA seq
675 aa
AA seq
DB search
MDISANPIEKTAVHFILHSNPEHERNHDDRWMGRGRGNRWKHNKNYGGRGSSRGRGRGRD
SNQYYSGSGGASYFDQEGDVMMGGDAEHGVARRYNPYSSDRPMSRHGRRNQYQGKNNRPS
QQPHDGSRARRLGLPLQSQGRSWSKVSVSGAKKIEKQTLLDLLGKQVPGNFRPIQFTYNS
ETAVFFLNDRDVADFLRNLRYLPVPNSDLKLKVHVRASSPPFTVMNDENKAKLTTAMSAR
YDPSIKVLDLTAFHDEQSLIQEGLFVPLNRTVVISSVAAIIAKNIPELVGLNLSKNRLLS
LSLLQDMTSKATNVTSLNLGHNQLNRIDELDKIKQWKLVELVLDGNPLCDKFSSKADYIS
AVRKRFPKVVKLDGNDLPPPITFDVSTSVVPASKGSYFVNSEVQDLVVRFLKEYYTIYDS
DSRQPLVDAYHEMAVFSLTMATNPSIEKQPTLADYVSESRNALRIRGDDRSKARTMEKLL
KHGRLQVVSSLSSLPKTTHDANSFVVDVSLVSSTLLSFVVSGLFKETDNKADKPPIRAFS
RCFIAVPANGGVLISNDMLTITNATPEQQQAAFKSTGPTPSSSPVSSNPPALTSPVPSTS
GATSPVGPVLSPQQQLESLPLVRQQMVVSFSEQSGMNYIFSFRCLEDNGWDYEKSAQTFM
NLKTEGKIPPDAFVK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacatttcagcgaacccgatcgaaaagactgctgtccatttcatcctccactcaaat
cctgaacatgaaagaaaccatgatgaccgatggatgggacgtggccgaggcaacagatgg
aaacacaacaagaactatggtggccgagggtcttcacgtggtcgtggtcgtgggcgtgat
tcaaaccagtattactctggtagtggtggcgccagttactttgaccaggaaggtgatgtg
atgatgggtggagatgcggaacatggagtggccagacgatacaatccatattcttctgat
cgtccaatgtcgcgccatggaagacgaaaccagtaccaaggcaagaacaaccgacccagc
cagcagcctcacgatgggtcacgagccagaaggttgggacttccattgcagagccaagga
aggagctggtccaaagtgtctgtttcaggtgcgaagaagattgaaaaacagaccctgttg
gatctgttgggaaagcaggtgccaggaaacttccgccccattcagttcacctataactca
gagacagctgtcttcttcttgaatgacagggatgtcgctgacttcctaaggaatttgaga
tacctccctgttccaaactccgatttaaaattgaaagtgcacgtgcgtgccagcagtccc
ccattcacagtgatgaacgacgaaaacaaggccaagctgacaacggcgatgagcgctcgt
tacgacccctccatcaaggtgcttgacctgactgccttccatgatgagcagtcactgatt
caagaaggcttgtttgtccccttgaacaggactgttgtcatcagcagtgtggccgccatc
attgccaagaatatacctgagctggtggggctgaacctgagcaaaaaccgcctgctttcc
ctgagcttgctgcaagacatgacgtccaaggcaaccaatgtgacctctctgaaccttggc
cacaaccagctgaaccgcattgacgagctggacaagatcaagcagtggaagctggtagag
ctggtactggatgggaaccccctgtgtgacaagttctcctccaaggcagactacatcagt
gctgtccgaaaacggttccccaaggtggtcaaactggatgggaacgacctgccaccaccc
atcacgtttgacgtgagcacgagcgtggtgccggcctccaaagggtcatactttgtgaac
agcgaggtgcaggacctggtggttcgattcctcaaggagtactacaccatctatgactct
gacagccgccagcctctggtggatgcctaccatgagatggccgtcttctctctgaccatg
gccaccaacccctccattgaaaagcagcccactctggccgactatgtctcagagagtagg
aacgccttgaggatcaggggagacgataggagcaaagctcgtacaatggaaaaacttctg
aagcatggacggctgcaagtggtatcttctctctcatcactgcccaaaacaacccatgat
gcaaattcctttgttgtcgatgtcagcttggtttcgagcaccctcttgagttttgttgtg
agtggcctgttcaaagaaacagacaacaaagcagacaagccacctatacgtgccttcagt
cgctgcttcatagcagtccctgccaacggcggtgtcctcatcagtaatgacatgctcacc
atcaccaacgccacgccggagcaacagcaggcggccttcaagagcaccggccccacccca
tcctccagccctgtttcctccaaccccccggctctgacctcccctgtcccctccaccagt
ggcgccacctctccagtggggccggtgttatccccccagcagcagttagagagtttgccg
ctggtgcgtcagcagatggtggtgtcgttcagcgagcagtccggcatgaactacattttc
tccttccggtgtcttgaagacaatggctgggactacgagaagtctgcccagaccttcatg
aacctgaagacagaaggcaagatccccccagatgccttcgtcaagtga
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