Babylonia areolata (ivory shell): 143282801
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Entry
143282801 CDS
T11321
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl04120
Ubiquitin mediated proteolysis
barl04137
Mitophagy - animal
barl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
143282801
04120 Ubiquitin mediated proteolysis
143282801
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
143282801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
barl04131
]
143282801
04121 Ubiquitin system [BR:
barl04121
]
143282801
03029 Mitochondrial biogenesis [BR:
barl03029
]
143282801
Enzymes [BR:
barl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
143282801
Membrane trafficking [BR:
barl04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
143282801
Aggrephagy
Other aggrephagy associated proteins
143282801
Xenophagy
Other xenophagy associated proteins
143282801
Ubiquitin system [BR:
barl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
143282801
Mitochondrial biogenesis [BR:
barl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
143282801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR
IBR_1
ubiquitin
Ribosomal_S27
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
143282801
NCBI-ProteinID:
XP_076444695
LinkDB
All DBs
Position
6:complement(17460204..17477688)
Genome browser
AA seq
468 aa
AA seq
DB search
MAMANITVVDFSPPDSIMVNVWFKSSQVSYQLHRCSTVGELRQRVATDHGVPPAEMRILL
GGRVLDDSLTIQASGVGMESTLFAIQQRSSSMSKPSATVTSAALSSPPLSTTTTAQAPLP
AAVVSHSANHPETAVTGAATCLSAPSTTHHDACRQQLSDQYYVYCKVCGQVRAGRLRVKC
SVCEGGAVLLDSDPGGWEDVLTVGHLTGSCQSLQCEGCQPMFYFKCAEQHGGSGTVVALR
HIMPNRRSVPCMTCEDVMSPVVVFPCEWSHVMCVGCFKMYCSIRLKERGFQHTAQYGYTL
PCPAGCSRSYIQEQHHFCVLGEGQYERYKDFAAEECLMAEGGVFCPRQECASGFLLGSAD
TRVVCPHCKFVFCRRCRRDGHDGTCRPVSATTLQPQEFSDAERAKRARWEQQTADTIQQT
TKGCPGCGARTERDGGCMHMRCARCDEEWCWLCVKPWDRDCQGAHWFG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccatggccaacatcactgtggtggacttctctccccctgacagcatcatggtcaac
gtgtggttcaaatcctcccaggtgtcctaccagctgcaccgctgcagcacagtgggggag
ctgcgacagcgtgtggccacggaccacggtgtgccaccggccgaaatgaggatcctgctg
ggtggccgtgtgctggatgacagcttgaccattcaggccagtggtgttggcatggaaagc
acactatttgccatccagcagagatcatcctcaatgtcaaaaccatcagccacagtgaca
tcagctgcactgtcatcgccccctctgtcaacaacaacaacagcacaagcaccactaccg
gcagcagtggtgtctcactccgccaaccatccggagactgcagttacaggggcagcaacc
tgtctgtctgccccgtctacgacacaccatgacgcatgtcgacagcagctgtctgaccag
tactacgtgtactgcaaggtgtgtggtcaggtgcgcgccggtcgcctgcgcgtgaaatgc
agcgtgtgtgagggaggagctgttcttctggactcagatccggggggctgggaggatgtg
ctgactgtcggacacctgaccggcagctgtcagtccctgcagtgcgagggatgccagccg
atgttttacttcaagtgtgcggagcagcatggcggcagcggaacggtggtggcgctgcgt
cacatcatgcccaaccgacgctccgtaccgtgcatgacctgcgaggacgtcatgagccca
gtagttgtcttcccctgtgagtggagccacgtgatgtgtgtgggatgcttcaagatgtac
tgctccatccggctgaaggagcggggatttcagcacacagcgcagtatggctacaccctg
ccctgcccagccggttgctcccggtcgtacatccaggagcagcaccatttctgcgtgctt
ggggaggggcagtacgagcgctacaaggactttgccgctgaggagtgtctgatggcggag
gggggcgtgttctgcccgcgccaggagtgcgcctcgggctttctgctgggctctgcagac
acccgcgtggtctgcccccactgcaagtttgtgttctgccgacgctgccggagagacggc
catgacggtacctgtcgtcctgtcagcgccaccacactgcagcctcaggagttcagtgac
gcagaacgtgctaagcgtgcacggtgggagcagcagacggcagacaccatccagcagacc
accaagggctgtcctggctgcggcgcccgcaccgagagggacggcgggtgcatgcacatg
cggtgcgcgcggtgtgacgaggagtggtgctggctgtgtgtcaagccctgggacagagat
tgtcagggtgcccactggtttggttaa
DBGET
integrated database retrieval system
