Babylonia areolata (ivory shell): 143284891
Help
Entry
143284891 CDS
T11321
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
barl Babylonia areolata (ivory shell)
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
barl04121
]
143284891
Enzymes [BR:
barl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
143284891
Ubiquitin system [BR:
barl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
143284891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Pox_A12
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
143284891
NCBI-ProteinID:
XP_076448126
LinkDB
All DBs
Position
8:47760453..48297269
Genome browser
AA seq
789 aa
AA seq
DB search
MSCVIRSGLSPVGALSARAIESKTTISRYAVPVSVNGQDLSQSSHDEAVEAFRTATEPIV
VEVLRRVGGKSGKSGGHHHHHHQPHHHGHSSPSPSAKSSRPPTIPAPPSSSSSSSSSSSS
SSGAVAMVSIATQTEEDFYCYNRPPTPPPGFYPVNISGLYQPASRRPVAFSPSAEMGLTD
IEMAHQLDLDDPFFDDRQYEMVYEEVVLHRSSSDEKLGLTLCYGSLEDEVTDIFISEIDP
CSLAGRDGRVREGDQILQINGVDVHSREQAISLFSNQEPDITLLVARPQLQIDDGFMEEP
NLVLEDLHMDLLEKHHHDNMHFMASMLAARTQLEEEGGTTDTATTETSSQRHEKDSGVGK
TDESTRNDESSEQEMFDTMPAPGSKLRTSLAMTRGLAGSPQHYSNESVTSTDPDLGLRAV
QDIASEDCEKFRHMLHDRCGPGQLHEGAALYRKDSEGSLERELAQLNREMEEIQVECQEI
VESHLLKEQHRIFPQQLPFGQYDVPIINGHGAPKAAADTQRSPRIVPRMGTRLDCIKHMQ
ALEPLDLWAQQRRLALAASGQQGAPSGMGTGTSSGRSERDRDQSTTSAYNTGGESCRSTP
LTLELNVASDEGDKGFKNSMLCLAATPSSVLLPQSSSDTEKQTQTPTGKSRGSGSSEDSG
QGVRGVAGSQGGGGGGVAENLIAAGLSAQAESLQDLYMRSADIMYTNHANLQHTIAVQQK
LFQQQLEQQKRLRTGARGRQGRRPLLPADHPAPPQRHGAVGGGGGEATQPQHHHAVRQQP
DGVGGEAAP
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtgattcggagtggcctttcccctgtgggagccctctctgctcgggcaatc
gaaagtaagacaacaatcagtcgttatgcggtgcctgtgagcgtcaatgggcaggatcta
tcccagtcgagccatgacgaggctgtagaggccttccgcacggccacagagcccatcgtg
gtggaggttttacgccgagtgggcggcaagagcggcaagtcgggcggccaccaccaccac
caccaccaaccccaccaccacggacacagctctccctccccctccgccaagagcagccgc
ccccccaccatccccgcgcccccctcgtcgtcgtcttcgtcgtcgtcatcgtcgtcgtcg
tcgtcgggcgctgtcgccatggtgtcgatcgccacccagacggaggaggatttttactgt
tacaaccggccccccaccccgcccccaggattctacccggtcaacatcagcgggctgtac
cagcccgcctcccgtcgcccggtggccttctcccccagtgccgaaatgggactgaccgac
attgagatggcacaccagctggacttggatgatccgttttttgacgaccgccagtacgag
atggtgtatgaggaggtggtgttacaccggtcatccagtgacgagaagctgggtctgacc
ctgtgttatgggtcactggaggatgaggtcaccgatatcttcatcagtgagatcgatccc
tgcagtctggcgggcagagacggccgtgtgagggaaggggaccagatcttacagatcaac
ggggtggacgtgcacagccgggagcaggccatctctctcttctccaaccaggaaccagac
atcaccctgctggtggccagaccccagcttcagattgatgacggcttcatggaggagccc
aacctggttctggaggacctgcacatggacctgctggagaagcatcaccatgacaacatg
cacttcatggcctccatgctggccgccaggacgcagctggaggaggagggtggaacgaca
gacacggccaccacagagacgtcctcccagcggcacgagaaggacagcggggtgggcaag
actgacgagagcacgcgcaacgatgagagctccgaacaggagatgtttgacaccatgcca
gccccaggctccaagctgcgcaccagcctggccatgacgcggggcctggcgggaagcccc
cagcactacagcaacgagtcggtcacctccacggaccccgacctgggcctcagggccgtc
caggacatcgccagcgaggactgcgagaagttccgccacatgctgcacgaccgctgcggg
ccgggacagctgcacgagggggcggcgctgtaccgcaaagactctgagggcagcctggag
cgggagctggcccagctcaacagggagatggaggagatccaggtggagtgccaggagatc
gtggagtcgcacctcctcaaggagcagcaccgcatcttcccccagcagctgcccttcggt
cagtacgacgtgcccatcatcaacgggcacggggcacccaaggcggcagcagacactcag
aggagtccccgaatcgtgccgcgcatgggcacccgcctggactgcatcaagcacatgcag
gctctggagcccttggacttgtgggcccagcagcggcgcctggctctagccgccagcggg
cagcagggggcgccgtcgggcatgggcacgggcacgtctagcgggcgcagcgagcgggac
agggaccagtcgaccaccagtgcctacaacacggggggcgagagctgccgctccacgccg
ctgacgctggagctgaacgtggccagcgacgagggcgacaagggcttcaagaactccatg
ctgtgtctggccgccaccccctcctccgtcctgctgccccagtcctcctcggacacggag
aaacagactcagacccccacgggcaagtcccggggcagcgggtccagcgaggactcgggt
cagggggtgaggggagtggcggggagccaggggggaggaggcgggggtgtggctgagaac
ctgatcgcggcggggctgtctgcccaggcggagtccctgcaggacctgtacatgaggtcc
gcggacatcatgtacaccaaccacgccaacctccagcacaccatcgccgtgcagcagaag
ctcttccagcagcagctggagcagcagaagaggctgaggacgggggcccgcgggaggcaa
ggccgccgccccctcctccccgccgaccaccctgctcccccacagcgccacggggctgtc
ggtggtggaggaggggaagcaacccagccccagcaccaccacgccgtcagacagcagcca
gatggagtgggtggtgaagcggcgccctga
DBGET
integrated database retrieval system
