Babylonia areolata (ivory shell): 143285096
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Entry
143285096 CDS
T11321
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143285096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
barl03021
]
143285096
03036 Chromosome and associated proteins [BR:
barl03036
]
143285096
Transcription machinery [BR:
barl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
143285096
Coactivators
SAGA/TFTC/STAGA complex
143285096
Chromosome and associated proteins [BR:
barl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
143285096
STAGA complex
143285096
TFTC complex
143285096
SAGA complex
143285096
SLIK complex
143285096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_Nup120_160
WD40_RFWD3
eIF2A
WD_LRWD1
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_WDR75_2nd
WD40_like
Beta-prop_RIG_1st
Beta-prop_ACSF4
PROPPIN
Motif
Other DBs
NCBI-GeneID:
143285096
NCBI-ProteinID:
XP_076448428
LinkDB
All DBs
Position
1:62128256..62146519
Genome browser
AA seq
676 aa
AA seq
DB search
MADTSERKGNSNNIMASLATNPDQKQTILKFLQFLRDNNLQETETVLKKEIKLDDSKLPL
PEKTEKPQTPSAVSQALAAYKSSDDPRIYQNVYSDLKAFIDTCLDVHKVELSMILYPVFI
HMYLELVYNGHGEHAFQFFQRFSRDQEDYRADDLARLVAVQRREHMEVDQIMSTFKSSKF
VIRMSRDSYTHLKRHLQEKHLTILINMIQEHLFIEVFDGMPRTQEQIHATSGALLGEAEK
EANKVRVYYGLLKEPDLNIPLEDEEEGEGDGDGTGKPKKKKAKKDPLLLKKSKNDPNAPQ
PTRIPLPELKDQDKVEKIAAFREALKRVKLSSEQLPSICFYTFLNSTQGVTCVDFTDDST
MLAAGFQDSNVRVWSLTPNKLRAMKSAADLEIIDKEADDVLERMMDDMTGTDTKLLVGHA
GPVYAVSFSPDKNGLISSSQDGTVRLWNLKTWTNIVCYKGHNYPVWDAKFGPHGHYFLSG
GMDRTGRLWSTDHYQPLRLFVGHQSDVECVQFHPNSNYVATGSSDRTVRLWDVLNGTCVR
IMTGHKASIQCMTFSSDGKYLATAGVDHTVIVWDIASGTAVAHLTAHTNVVYALCFSRDG
TVLASGGMDNSIRLWDLARIMEEQDPESDNNIPSSLSVNTNPALLLGTYYTKCTPVLGLH
FTRRNVLIGCGPYVTS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacgtctgaacgcaagggcaattcaaacaacattatggcatcactagcaaca
aatccagaccagaagcaaacgattctaaaatttttgcagtttctccgtgacaacaactta
caggaaacagaaacagttctcaaaaaggagatcaagttagatgacagtaaactgcctctg
ccagagaaaacagagaaaccacaaacaccatcagcagtatcccaggctcttgctgcttac
aaaagttccgatgacccaaggatatatcagaatgtctattctgatttgaaggctttcatt
gatacctgcctggatgttcataaggtggaactgtctatgatcttgtatccagtcttcatc
cacatgtatctggagttggtgtataatggtcacggagagcatgcatttcagtttttccag
cggttcagtcgggatcaggaggactaccgggcggatgacctggcacgccttgtggctgtc
cagaggagagagcacatggaagtggatcagattatgagcactttcaaatcaagcaaattt
gtgattcgaatgtcgcgcgattcatatacccatctgaagcgtcacctgcaagagaagcat
ttaacaattctaataaacatgatacaggagcatcttttcattgaagtgtttgatggaatg
ccaagaacccaggaacaaatacacgctaccagtggagctttgttgggagaggcagaaaag
gaagccaacaaagtcagagtgtactatggccttctgaaagaacccgatctgaacattcct
ttggaagatgaagaagaaggagaaggggatggagatggcacaggcaagcccaagaaaaag
aaagccaagaaggatccattgttactgaaaaaatcgaaaaatgaccccaatgcaccacag
ccaacaagaataccacttcctgagttgaaagaccaagataaagtggaaaaaattgcagcc
ttcagggaggcattgaagagagtcaagcttagttcagaacagctgccatccatttgtttc
tacacattcctcaacagcactcaaggagtgacatgcgtggacttcactgatgattctacg
atgctggctgctggattccaggactccaatgtgcgggtgtggagtctgacccctaacaaa
ctgagggccatgaaatctgctgcagatctggaaatcatcgacaaagaagcagatgatgta
ttggagcgaatgatggatgacatgactggcacagacaccaaactgctggtgggacatgcg
ggtccagtgtacgctgtgtctttcagccctgataaaaacggcctcatctcctcgtcacag
gatggtacagttcgcctctggaatcttaagacttggaccaacattgtctgctacaaagga
cataactacccagtatgggatgcgaagtttggccctcatggtcactatttcctttctggt
gggatggatcggacaggacgattgtggtccactgaccattatcagccattgcgtcttttt
gtcggtcatcagtctgacgttgagtgtgttcaattccaccccaacagtaactacgtggcc
acagggtcaagtgatcgcactgtcaggctgtgggatgtcttgaacggcacctgtgttcgc
atcatgactgggcacaaggcatccatccaatgcatgacattttcgtcagatggaaagtac
cttgcaactgctggtgtggaccatacagtgatagtgtgggatattgccagtggaacagcg
gtcgcccatctaacagcacacacaaatgttgtgtatgccttgtgcttcagtcgggatggc
actgttctggcttcaggtggaatggacaacagcattcgcctttgggacttggcacgtatc
atggaggagcaggaccctgaaagtgacaataatattcccagttctctcagcgtaaatacc
aatcctgcgcttctgctgggcacatactacaccaagtgcacgccagtgctggggttacat
ttcacacggagaaacgtgctgatcggttgtggaccttatgtaacatcatga
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