Babylonia areolata (ivory shell): 143285549
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Entry
143285549 CDS
T11321
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
barl Babylonia areolata (ivory shell)
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
barl03041
]
143285549
03016 Transfer RNA biogenesis [BR:
barl03016
]
143285549
Enzymes [BR:
barl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143285549
Spliceosome [BR:
barl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
143285549
Transfer RNA biogenesis [BR:
barl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
143285549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
TPPII
Motif
Other DBs
NCBI-GeneID:
143285549
NCBI-ProteinID:
XP_076449032
LinkDB
All DBs
Position
9:complement(46696361..47157378)
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AA seq
731 aa
AA seq
DB search
MTAFEEMGVMPEIAQAVEEMDWSLPTDVQAEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQIVHETLLDQREGKGARKSAHSAGSHKWKMNAHDRGDAMAIDPEGTLCQARDAQGWHGT
RSNKAVVGGGKWYYEGTVTDEGLCRLGFSTGQARLDLGTCKNGFGFGGTGKKSCGKQFDS
YGEPFGMNDTIGCYLDLDRGEISWAKNGIDLGKAYDIPPNMRSEQFYAAVVLKNAEMLFN
FGDTPFKYPPKNGFVGLSSASGKSVTESKIISGGGVSAKPAPNAPQAIIIEPSRELAEQT
IVQLQKFKTHLSNPTVRDLLIIGGVAAREQMDALERGVDIVCGTPGRLEDLISTGKLALH
QVRFFVLDECDGLLSQGYGDLINRLHGQIPKVTSDGKRLQMIVCSATLHSFDVKKMAERL
MYFPTWIDLKGADAVPETVHHCVCLVDPKTDVEWKSMKRHVTTDGVHQKDRVGPDSYSPE
TYSEAVKMLKGEYTVRAILKHNMDRALIFCRTKLDCDNMERYLNQVGQGKLTCVCLHSDR
NPAERKGNLQKFKDGKVRFMICTDVAARGIDVSGLPFVINVTLPDEKQNYIHRIGRVGRA
ERMGLAVSIVSTVKEKVWYHSNCKNRGRGCYNTNLTDVGGCCIWYDEPKLLSDIEEHLDI
TIDRIDKTFDVPVNEFDGKVTYGQKRKTAGSLYKGHVEFLAPTVSELAQLEKCAQTSFID
LKYKKKFARRA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattcgaagaaatgggcgttatgccagaaattgcccaagctgtggaagagatg
gattggagcttgccaactgatgttcaggcagaagccattcccatgattcttggaggagga
gatgttctgatggcggctgagacaggttctggtaaaacaggggctttctgcttacccatt
ctgcaaattgtccacgaaacattgctggatcagcgggaaggcaaaggtgctcgcaagtca
gcgcattctgctggaagccacaagtggaagatgaacgctcacgaccgaggtgacgctatg
gccatcgacccagaggggacgctgtgtcaggcacgtgacgctcagggatggcacggcact
cgctccaacaaggccgtcgtcggaggaggcaagtggtactacgagggcacggtgacggac
gaggggctgtgtcgactggggttctccacagggcaggcccgcctggacctgggcacctgc
aagaacggcttcggctttgggggcaccgggaaaaagtcctgtggcaagcagtttgacagc
tatggagagccgtttggaatgaacgacactattggctgctatctggatcttgacagagga
gagatatcctgggccaaaaacgggatcgacttgggcaaggcctatgatattccacccaac
atgaggtcagagcagttctacgctgctgttgtcttgaagaatgcagaaatgttgttcaac
tttggagacaccccattcaaatacccccccaagaacggatttgttggtctgtcaagcgcc
tctggcaagagtgttaccgagtcaaagataatttctgggggaggggtgagtgcaaagcca
gcgcccaatgcaccacaggccatcatcattgagccatctagagagcttgcagaacagacc
atagtgcagctccagaagttcaagacgcacctgagcaaccccactgtgcgtgacctgctc
atcatcggaggggtggccgctcgggaacagatggatgccctggaacgaggggtggatatt
gtgtgtgggacaccaggacgtctggaagacttgatctccacgggcaaactggcccttcac
caggtccgcttcttcgtcctggatgagtgtgacggtctgctgtcccaaggctatggggac
ctgatcaaccgactgcacggacagattcccaaggtcacctctgacggcaagcgtctccag
atgatcgtctgctctgccactctccactcctttgatgtcaagaaaatggctgagcgtctg
atgtacttcccaacctggattgatttgaagggcgctgacgccgtgccagaaactgtgcac
cattgcgtgtgcctggtggaccccaagacggacgtggagtggaagtcgatgaaacgtcac
gtgaccacggatggcgtgcatcagaaggaccgggtgggacccgacagctacagcccagag
acgtactctgaggcagtgaagatgctgaagggggagtacactgtgcgcgccatcctcaag
cacaacatggaccgggccctcatcttctgccgcaccaagctggactgtgacaacatggag
aggtacctcaaccaggtgggccaaggcaagctgacctgtgtgtgcctgcacagtgaccgc
aaccctgccgagaggaaaggcaaccttcaaaagttcaaggacggcaaggtccgcttcatg
atctgcacggacgtggctgctcgaggcattgacgtgtctgggctgcccttcgtgatcaac
gtgacactccctgacgagaagcagaactacatccaccgtattggccgtgttggacgtgca
gagcgcatgggactggcagtcagcattgtttccactgttaaagagaaggtgtggtaccac
agcaactgtaagaaccggggccgggggtgctacaacaccaacctgacggatgtcggggga
tgctgcatctggtacgacgagcccaagctgctgtcggacatagaggagcatctggacatc
accattgaccggatcgacaagaccttcgacgtgcccgtcaacgagtttgacggcaaggtc
acctacggtcagaagcgtaaaaccgcaggctccctgtacaagggccacgtggagttcctg
gcgcccacggtgtcggagctggcccagctggagaagtgtgcccagacctccttcatcgac
ctcaagtacaagaagaagtttgccaggcgcgcctag
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