Babylonia areolata (ivory shell): 143288381
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Entry
143288381 CDS
T11321
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03030
DNA replication
barl03420
Nucleotide excision repair
barl03430
Mismatch repair
barl03440
Homologous recombination
barl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143288381
03420 Nucleotide excision repair
143288381
03430 Mismatch repair
143288381
03440 Homologous recombination
143288381
03460 Fanconi anemia pathway
143288381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
barl03000
]
143288381
03032 DNA replication proteins [BR:
barl03032
]
143288381
03400 DNA repair and recombination proteins [BR:
barl03400
]
143288381
Transcription factors [BR:
barl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
143288381
DNA replication proteins [BR:
barl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
143288381
DNA repair and recombination proteins [BR:
barl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
143288381
MMR (mismatch excision repair)
143288381
DSBR (double strand breaks repair)
HR (homologous recombination)
143288381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
143288381
NCBI-ProteinID:
XP_076452896
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Position
12:9623065..9644713
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AA seq
613 aa
AA seq
DB search
MATLSGGSIDVMVKGGPQTLQPVLQVINLKKIASNGSNDRYRLLVSDGETTYSHVMLATQ
LNVMMEANEIDAFCVIKVNKYLCNTIQADKRILILLDITVLKKGSEVKERLGNPSQYKAD
GTAGATNGTAHGDSAPPAKAPAPTLANPARPLGGIKTSPPKQGPNSFGGNKPPSGPGTPG
SNRVHKIATLTPYQNRWRIRARVTQKSSIRTWSNSRGEGRLFSVNFLDDSDEIRATGFND
AVDKFYDLLEVNKVYYVSRCSIKTANKQYSNLKNDYEMTFNNDTIIERCDDDVDLPSMTF
DFVPISEMEKHAANSIVDVVGVVKLCNDLSTVIARQSQKELTKRDLQIVDQSGVAISITL
WGNDAQNFDGSSNPVIAVKGARLSDFGGRSLSVLSSSQLVINPDIREAHVLRGWYDREGA
SMDFGSFRSEGGGAGGSTNWKTFGQAVSENLGHGDKADYYTTKATIMVMKKENCMYQACS
TENCNKKVVDQGNGLYRCEKCNRESPSYKWRMILQTTMADFSGYQWVSCFQDSAETLLGV
KADELGDMRQNDEGAFDQVFQRGMFKEYTFRLRSKMETYNEESRLKTVCVAATPVDYVQY
GKHLLEEIRKFGL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttagtggaggatcgattgatgtcatggtgaaaggtggcccacagactctt
cagccagtgctccaagttattaacctgaagaaaatagcatccaacggaagcaatgaccgc
tacaggttgcttgtttctgatggggaaacgacatattcccatgtgatgctggccacccag
ctgaatgtgatgatggaagccaatgaaattgacgccttctgcgtcatcaaggtgaacaag
tacctgtgcaacactatccaggccgacaagcgaattttgatcctgttggatatcactgtg
ctgaagaaagggtccgaggtcaaagaaaggttgggaaacccatctcagtacaaggctgat
ggaacagcaggtgccaccaacggtactgctcatggagactccgcgccaccagctaaagcc
cctgcacccacccttgctaacccagctcgccctctgggtggcatcaaaacctctccacca
aagcagggaccgaacagttttggtggaaacaaacctccatcgggcccaggcactccaggc
tccaaccgtgtccacaaaattgccaccctcactccataccagaacagatggcgcatcagg
gcaagagtaacccagaagtcgagcatccgcacatggagtaactctaggggtgaaggtcgt
cttttcagtgtcaactttttagacgacagtgacgaaatcagagccactggtttcaacgat
gctgtggacaaattttatgacctgctggaagtcaacaaagtgtactatgtgagccgttgc
agcatcaagacagccaacaaacagtactccaacttgaagaacgactacgaaatgaccttc
aacaacgataccatcattgagcgatgtgacgacgatgtcgacctcccgtccatgaccttt
gactttgtcccgatcagtgagatggagaagcacgcagcaaattccattgttgacgtagtg
ggggtggtgaagttgtgcaacgacctgtccacggtgattgcccgacagagtcagaaggag
ctgaccaagcgagacctgcagattgtggaccagtcgggcgtggccatcagcatcaccctg
tggggaaacgacgctcagaactttgatggaagcagcaatccagtgattgcagtcaaaggg
gcacgactctcagatttcggaggccggtccctctcggtgctgagctccagtcagctggtg
atcaaccctgacatcagggaagcccacgtgctgcgagggtggtacgaccgggaaggggcg
tccatggacttcggttctttccgcagtgaaggcgggggtgcaggaggcagcaccaactgg
aagacctttgggcaagctgtcagtgagaacctgggtcacggagacaaggccgactactac
accaccaaggcgaccatcatggtcatgaagaaggaaaactgcatgtatcaggcttgttca
acagaaaactgcaacaaaaaggtggttgatcaaggcaacggtctatatcgctgtgaaaag
tgtaatcgtgaatcccccagctacaagtggcgcatgattctgcaaacgacgatggccgac
ttctcagggtaccagtgggtgtcctgcttccaagactctgccgaaacgttgctgggggtc
aaggctgatgagctgggggacatgagacagaacgatgaaggggcttttgatcaagtgttc
cagcgaggaatgttcaaggaatacaccttccgcctgcgctctaaaatggaaacatacaat
gaggagagccggctgaagacggtctgtgtcgctgccacgccggtggactatgtgcagtac
ggcaaacacctgctggaggagattcgaaagtttggcctgtag
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