Babylonia areolata (ivory shell): 143288409
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Entry
143288409 CDS
T11321
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143288409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
barl03041
]
143288409
Spliceosome [BR:
barl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
143288409
Complex C
U5 SnRNP specific factors
143288409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
143288409
NCBI-ProteinID:
XP_076452959
LinkDB
All DBs
Position
12:18670508..18731077
Genome browser
AA seq
2373 aa
AA seq
DB search
MAFPYTVIGPGGHSYIVGQIPVLQQTLTPQLVSQVPMQVTAQPMQQHVQPQQPQPPQQKL
PDYMSEDKLQEKARKWQQLQSKRYSEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKF
RHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFINEIPWVIEPVYI
SQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVMDVEPLEPIQMELDMEEDK
AVLEWYYDHKPLIDSRSVNGSTYRRWQLSLPVMSVLYRLANQLLTDLVDLNYFYLFDLKS
FFTAKALNLAIPGGPKFEPLVKDKELQDEDWNEFNDINKIIIRQPVRTEYRIAFPYLYNN
IPFQVHLSWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRTAVKSSDPVIDDDEDFELPE
HVQPFLSDTPLYTDNTANGIALLWAPRPFNLRSGRTRRAIDVPLVKSWYREHCPAGMPVK
VRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQTTELDWVEVGLQVCRQGYN
MLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHV
QYRLGNIDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVG
KGPGCGFWAAGWRVWMFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFD
LELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRY
VKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYIT
AEEAVAIYTTMVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQRE
ELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYL
DQYLWYEADKRRLFPPWIKPSDSEPPPLLTYKWCQGINNLQEVWDTSEGECNVMMESTFE
KMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQ
FYGLVLDLLVLGLHRASEMSGPPQMPNDFLTFQDVVTETAHPIRLYSRYIDRIHIFFRFS
AEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIQNRLP
RSVTTIQWESSFVSVYSKDNPNLLFNMCGFECRVLPKCRTTHEEFTHRDGVWNLQNEVTK
ERTAQCFLRVDEESMNRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRESVVNTQ
ELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRW
SKQTDVGITHFRSGMSHDEDQLIPNLYRYILPWESEFIDSQRVWAEYALKRQEANAQNRR
LTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDG
KLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEESMKYKKLTNAQ
RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLW
QKIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNASRP
SLLADSKDTMDGATTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVL
IAIDLAYNLHSAYGNWFPGAKPLIQQSMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY
LSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII
HTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNI
VIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRA
LHVNNDKTKILLKPDKTTVTEAHHIWPTLTDEEWMKIEVQLKDLILADYGKKNNVNVASL
TQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTITVNKHGDEIITSTTSNY
ETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFIIISDLRA
QIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTVHVPNILPDHEYLKEMEPLGWIHTQP
NELPQLSPQDISTHARIMADNPTWDGEKTVVITCSFTPGSCSLTAYKLTPSGYEWGRQNK
DTGNNPKGYLPSHYERVQMLLSDRFLGFFMVPNQGSWNYNFMGVRHDPTMRYELVLSNPK
EFYHEVHRPTHFQIFANTEESLQIGADREDLFA
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcccttacacagtgattggccctggcggccattcctacatcgtgggtcagatt
cctgtgctgcagcagacgttgaccccacagctggtgtcccaggttcctatgcaggtcacg
gcacagcccatgcagcaacacgtgcaaccccaacagcctcagccgccgcagcagaaactg
ccggactacatgtctgaggacaaactgcaggaaaaagctcggaaatggcagcagctgcag
tcaaagcgttactctgagaaacgcaagtttggtttcgtggatgcccagaaggaagacatg
cccccagagcatgtgcgcaagatcattcgggaccacggtgacatgaccaaccgcaagttt
cggcatgacaagcgcgtgtacttgggagcgctgaagtacatgcctcatgcagtgatgaag
cttctggagaacatgccgatgccctgggagcagatccgtgatgtcaaggttctgtatcac
atcacgggggccatcacctttatcaacgagatcccgtgggtcattgaacctgtgtacatc
tctcagtggggaaccatgtggatcatgatgcgacgcgaaaagcgagaccgtcgccacttc
aagcgcatgaggttccctccctttgatgatgaagagccccccctggactacgcagacaac
gtgatggacgtggagcccctggagcccatccagatggagctggacatggaagaggacaag
gctgttctggagtggtactatgaccacaagcccctcatcgacagcaggtcagtgaacgga
agcacctatcgtcgctggcagctgagcctccccgtgatgtcagtgctgtatcgattggcc
aatcagctgctgaccgatctggtcgacctgaactacttctacctgtttgacctcaagtcc
ttcttcaccgccaaggcccttaacttggccattcctgggggacccaagttcgagcctctg
gtcaaggacaaagagctccaagacgaggactggaacgagttcaacgacatcaacaagatc
atcatccggcagccggtgcgcacagagtaccgcatcgccttcccctacctgtacaacaac
attcccttccaggtccacctgtcctggtaccacacccccaatgttgtgttcatcaaaaca
gaggaccctgacctgccagccttctattttgaccctctgatcaaccccatctctcaccgc
acagctgtcaagtcatcagacccagtgattgatgatgacgaggactttgagctgccagag
cacgttcagccgttcctcagtgacacgcccctgtacacggacaacacagccaatggcatc
gctctgctctgggccccacgacctttcaacctgcgctctggcagaactcgccgtgccatt
gatgtaccgctggtcaaatcatggtacagagaacactgcccagccggcatgccggtgaag
gtgcgtgtgtcctaccagaaactgctcaagtactatgtcctcaacgccctcaaacacagg
cctccaaaggcacagaagaagaggtacctgttccgatcgttcaaggcgaccaagttcttc
cagacgacggagctggactgggtggaggttgggctgcaggtgtgccgtcagggttacaac
atgctcaacctgctcatccaccgcaagaacctcaactaccttcacctggactacaacttc
aacctgaagcctgtcaagactctgacgaccaaggagcgtaagaagtctcgtttcggaaac
gcctttcacctgtgtcgggagatcctgcgtctgacaaaactgattgtggacagtcatgtg
cagtatcgccttggcaacatcgatgcttttcagctttcggacggactgcagtacatcttt
gcccatgtgggtcagctgacgggcatgtaccgctacaagtataaactgatgagacagatc
cgcatgtgcaaagatctcaagcatctcatctactacaggtttaacacgggtcccgtgggc
aagggacctggctgcgggttctgggcagccgggtggagggtgtggatgttcttcatgcga
ggcatcacccctctgctggagcgctggctgggcaacctgctgtcccgacagttcgagggt
cgccactccaagggcgtggccaagactgtcaccaagcagcgggtggagagtcacttcgac
ctggagctgcgtgccgcagtgatgcacgacatcctggacatgatgccagaaggcatcaag
cagaacaaggcccgcaccatcctgcagcatctctcggaggcctggcgctgctggaaagcc
aacattccctggaaggtgccaggcctcccgaccccgatcgagaacatgatcctccgctac
gtcaaagccaaagcggactggtggaccaacactgctcactacaatcgtgagcgaatccgc
cgaggggccacagtggacaagacagtgtgcaagaaaaacctggggcgtctcactcgccta
tacctgaaggccgagcaggagagacagcacaactacctgaaggatggtccgtacatcacg
gcagaggaggcggtggccatctacaccaccatggtgcactggctggagagtcgtcgcttc
tcccccatccccttcccccccctctcctacaagcacgacaccaagctgctcatcctggcc
ctggagaggctcaaggaggcgtacagtgtgaagagtcgcctgaaccagtctcagagggag
gagctgggtctgatcgagcaggcgtacgacaaccctcacgaggccctgtcaaggatcaag
cgtcacctgctgactcagcgagccttcaaagaggtgggcatcgagttcatggacctgtac
agccacctggttcctgtgtatgacgtggagccgctggagaagatcaccgacgcctacctg
gaccagtacctgtggtacgaggcggacaaacgccgcctcttcccgccatggatcaagccc
tccgactccgagccaccacccctcctcacctacaagtggtgccagggcatcaacaacctg
caggaagtgtgggacacgtcagaaggggagtgcaatgtgatgatggagtctacatttgag
aagatgtacgagaagatcgacttgacgctgctcaacagactgctccgtctcatcgtcgac
cacaatatcgctgactacatgaccgccaagaacaacgtcgtcatcaactacaaggacatg
aaccacaccaactcgtacggcatcatccggggcctgcagttcgcctccttcatcgtgcag
ttctacggcctggtgctggacctgctggtcctcggcctgcaccgtgcctctgagatgtcc
ggacccccccagatgcccaacgacttcctcaccttccaggatgtggtcaccgagacagct
caccccatccgtctctactcacgctacattgaccgcatccacattttcttcaggttcagc
gccgaggaagcccgtgacctgatccagcgttacctgacggagcaccctgaccccaacaat
gagaacattgtgggctacaacaacaagaagtgctggccgagggactcccgcatgcgcctc
atgaaacatgacgtcaacctgggtcgggcggtgttctgggacatccaaaaccggctgcct
cgctcggtgaccaccatccagtgggagagcagcttcgtgtcggtgtacagcaaggacaac
cccaacctgctgttcaacatgtgcggctttgagtgccgcgtgctgcccaagtgccgcacc
acccacgaggagttcacccacagggacggcgtctggaacctgcagaacgaggtgaccaaa
gaacgaacggcccagtgcttcctgcgtgtggatgaggagtcaatgaaccgtttccacaac
cgtgtgcgacagatcctcatggcttccgggtccaccaccttcaccaagattgtgaacaag
tggaacacggctctgattggcctgatgacctatttccgggagtcggtggtgaacacacag
gagctcctggacctgctggtgaagtgtgagaacaagatccagacccgcatcaagatcggc
ctcaactccaaaatgccctcccgcttccctcccgtcgtgttctacacgcccaaagagctg
ggaggcctgggcatgctgtccatgggccacgtgctgatcccccagtcggacctgcgatgg
tccaagcagacggacgtgggcatcacccacttccgctccggcatgagtcacgacgaggac
cagctcattcctaacctgtaccgctacatcctgccctgggagagcgagttcatcgactcc
cagagggtctgggctgagtacgctctcaagcgacaggaggccaatgctcagaacagacgt
ctgaccctggaggacctggaggacagctgggaccggggcattccacgcatcaacaccctc
ttccagaaggacaggcacaccctggcctatgacaagggatggagggtgcgcactgacttc
aagcagtaccaggtcctgaagcagaacccgttctggtggacccaccagcgccacgacggc
aagctgtggaacctgaacaactaccgcacggacatgatccaggccctgggaggggtggag
ggcatcctggagcacaccctcttcaagggaacctacttccccacctgggagggtctcttc
tgggagcgagccagtggctttgaggagtcgatgaagtacaagaagctgaccaacgcccag
cggtcaggtctgaaccagatccccaaccgtcgcttcaccctctggtggtcacccaccatc
aacagggccaatgtgtacgtgggtttccaagtgcagctggacctgacaggaatcttcatg
cacggcaaaatccccacgctgaagatctccctcatccagatcttccgtgctcacttgtgg
cagaaaatccacgagagcgtggtgatggatctgtgccaggtgtttgatcaagaactggac
gccctggagatagagacggtgcagaaagagacgatccatccccgcaagtcgtacaagatg
aacagctcttgtgccgacgttctgctgttcgctgcctacaagtggaacgcgtccagaccc
tccctgctggctgactcaaaggacacgatggatggagcgacgacacagaagtactggatt
gacgtgcagctgaggtggggagactacgactcccacgatgtggagcgttacgcccgtgcc
aagttcctggactacaccacagacaacatgagcatctacccgtccccaacgggtgttctc
atcgccatcgatctggcctacaacctccacagtgcctacggcaactggttcccgggggcc
aagcccttgatccagcagtccatggccaagatcatgaaggccaacccggccctgtacgtg
ctgagggagcggatccgcaagggcctgcagctgtattcctcagagcccactgagccctac
ctcagctcccagaactacggggagctcttctccaaccagatcatctggtttgtggacgac
accaacgtgtaccgtgtcaccattcacaagacatttgagggtaacctgaccaccaagccc
atcaacggtgccatcttcatcttcaacccacgcacaggtcagctgttcctgaagatcatc
cacacgtctgtgtgggccggacagaaacgtctggggcagctggccaagtggaagaccgca
gaagaagtggcagccctgattcgctcactgccggtggaggagcagcccaagcagatcatc
gtgacccgcaagggcatgctggaccctctggaggtgcatctcctcgacttccccaacatc
gtcatcaagggcagcgaactgcagctgcccttccaggcctgtctcaaggtggagaagttt
ggtgacctgatcctgaaggccacagagccccagatggtgctcttcaacctgtacgacgac
tggctcaagaccatctcctcctacacagctttctcgcgtctgatcctgatcctgcgagcg
ctgcatgtgaacaacgacaagaccaagatcctgctgaaaccggacaagacgacggtgacg
gaggcccaccacatctggcccacgctgacggacgaggagtggatgaagattgaagtgcag
ctcaaagacctcatcctggctgactacggcaagaagaacaacgtgaacgtagcctccctg
acgcagtccgagatccgtgacatcattctgggcatggagatctcagccccctcggctcag
cgccagcagatcgctgagattgagaagcagaccaaggagcagtcacagctgacggccacc
accaccatcactgtcaacaagcacggtgacgagatcatcacctccaccaccagcaactac
gagacgcagaccttctcatccaagacggagtggcgggtgcgagccatctcggccaccaac
ctgcacctgcgcaccaaccacatctacgtgtcctctgacgacatcaaggagacgggctat
acctacatcctgcccaagaacgtgctgaagaagttcatcatcatctccgatctgcgcgct
cagattgcaggctacctgtatggtgtgagtccccctgacaacccgcaggtgaaggagatc
cgctgcattgtgatgccgccccagtggggaacgcatcagaccgtccacgtgcccaacatt
ctgcccgaccatgagtacctcaaggaaatggagcccttggggtggatccacacgcagccc
aatgagttgccacagctctctcctcaggacatcagcacccatgcccgcatcatggccgac
aaccccacctgggatggggagaagacagtggtgatcacctgcagcttcacacccggttcg
tgctcgctgactgcctacaagctgaccccgagcggctacgagtggggccgacagaacaag
gacacgggcaacaaccccaagggttacctgccctcccactacgagcgtgtgcagatgctg
ctgtccgaccgcttcctgggcttcttcatggtgcccaaccaggggtcttggaactacaac
ttcatgggtgtgcggcacgaccccaccatgaggtatgaactggtcctgtccaaccccaag
gagttctaccatgaagttcaccgccccactcatttccagatcttcgccaacaccgaggaa
tctctccagattggtgctgaccgggaagatctgtttgcctag
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integrated database retrieval system
