Babylonia areolata (ivory shell): 143288596
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Entry
143288596 CDS
T11321
Name
(RefSeq) THO complex subunit 5-like
KO
K13174
THO complex subunit 5
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03013
Nucleocytoplasmic transport
barl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143288596
09122 Translation
03013 Nucleocytoplasmic transport
143288596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barl03019
]
143288596
03041 Spliceosome [BR:
barl03041
]
143288596
Messenger RNA biogenesis [BR:
barl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
143288596
Spliceosome [BR:
barl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143288596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
CREPT
Motif
Other DBs
NCBI-GeneID:
143288596
NCBI-ProteinID:
XP_076453337
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Position
12:complement(37678809..37711225)
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AA seq
708 aa
AA seq
DB search
MSTMKTEMNADKKKKRILKTEPVIEQKKAKVHDGTSSKEYEVSLFHAEEEEAEKRNAESD
VEKFKASCNEIRDAMQDIHTIKKKPKLDTEEMEVRKMDVCLQFASLKKLNRLAHFRCRKA
REGTNEAKQRIEKYHLQLQNLLYEAMHLQKEITKCLEFKSKHEEIELVPTDDFYRDAPED
VSRQEVTGSDPHQQMLARLEWELEQRKQLAGKLKEAQTSREKISQEIQKKEDYLDTLQPK
LSSILEATRPVQNYLKMPYDEVREQQQTARHLPLPLYVLYMQASAYQQACDKFLKVTIEG
DVNAAKSFDLEVQEPDDDTDSDQDAEEQEKRNSKRRRKTVESRLKEKQQRVIRKHPLSVI
LEITGKDGSVLLLTFWFLPILHIITVGVKVVASKDVSTNSITGGDLLSAHSVLDELYPGD
HGETTPSPANQYELGRYGMGEFGQYVGMVGRPYMWAQWLGGLQFLSTADSDGGGASTSGA
GGGCCVSVRARTSVSATYMQQTIKRLRQRLKSRLGLLRQLVSLEQGIVPLSGPLVKKFPA
KVVSRLLSWKRVTYSDLEVLPHARRLIDNGFVSRNDLLFCAVLERGSAKLTAHVVVSVDY
PEVAPLFLTSIAWQSLRTALTDNHVKELEEEVNLHHGELVEDRGQDQLLAAQLVRLLVDF
DVYLETEVLDVSAPVEIPKEKVIPRVYRGPGRSKPYKYVPELGVFTQR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccatgaaaaccgaaatgaatgccgacaaaaaaaagaagcgcatcttgaagacc
gaacccgtcattgagcagaaaaaggcaaaggtgcatgacggaacatcttctaaggaatat
gaagtgtccttgtttcatgctgaggaagaggaagcagagaaacgcaacgctgaatcagat
gtcgaaaagttcaaagcctcttgcaatgaaatacgtgatgccatgcaagacatacatacc
atcaagaaaaagccgaagctggatactgaggagatggaggtgcgtaaaatggatgtgtgc
ctgcagtttgcctccttgaaaaagttgaacaggctagctcacttccgctgtcgcaaggcc
agagaagggaccaacgaggccaagcagaggatagagaagtaccaccttcagctgcagaac
ttgctgtacgaggccatgcacctgcagaaagagatcaccaaatgtctggagttcaagtcc
aagcatgaagaaattgagctggtgcctacggatgacttctacagggatgcccccgaggat
gtttcaagacaggaggtgaccggctcggatcctcaccagcagatgttggctcggctggag
tgggaactggagcagaggaagcagctggcaggcaagctgaaggaggcccagacgtccaga
gagaagatcagccaggagatccagaagaaggaggattacctggacaccctgcagcccaaa
ctgtcctccattctggaggcaacaagaccggttcagaactacctgaagatgccgtacgat
gaggtgcgagagcagcagcagacagcgagacacctgcctcttcccctctacgtcctctac
atgcaggccagtgcctaccagcaggcttgcgacaaattcctcaaagtgacgattgaaggg
gacgtgaacgctgccaagtcttttgacctggaggttcaggaaccagatgacgacacggac
agcgatcaggatgctgaggaacaagagaagagaaattcgaagcgaagacggaaaacagtg
gaatcccggctgaaggagaagcagcagagggttattcgcaagcacccgctgtcagtcatt
ctggaaatcacagggaaggatggcagcgtccttcttttgaccttctggttcctgcccatt
ctgcatatcattactgtaggggtcaaggtcgttgctagcaaagacgtctccaccaattcc
atcacagggggggacttgctgtcggcccactcggtgctggacgaactgtatcctggcgac
catggggagaccacccccagtcctgccaaccagtatgagctgggccgctacgggatgggg
gagtttggccagtacgtggggatggtggggcggccctacatgtgggcccagtggctcggg
ggactgcagttcctcagcacggccgacagtgacggggggggcgcctcaacctctggggcc
ggtggcggttgctgcgtcagcgtgcgggccaggacctcagtcagcgccacctacatgcag
cagacgatcaagcgtctccgccagcgcctcaagtcccgactggggctcctgcggcagctg
gtttctttggagcaaggaatcgtaccccttagcgggcccctggtgaagaagttccccgcc
aaggtcgtgtcccgcctgttgtcgtggaaacgggtgacctacagtgaccttgaggtgctg
ccgcacgcccggcgcctgatagacaacggctttgtgagccgcaacgacctgctgttctgt
gcagttctggagaggggctcagccaagttaacggcccatgtggtggtgagcgtggactac
ccagaggttgcccctctcttcctcaccagcatcgcctggcagtcgctgaggacggctctc
actgacaaccatgtcaaggagctggaggaggaggtgaaccttcaccacggggagctggtg
gaggatcggggccaggaccagctgctggccgcccagctggtgcgcctcctggtggacttt
gacgtctacctggagacggaggtgctggacgtgtccgcccctgtagagatccccaaggag
aaggtcatcccccgcgtctacagaggacctggtcgcagcaagccttacaagtatgtgcca
gagctgggagtgttcacgcagaggtag
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