Babylonia areolata (ivory shell): 143289796
Help
Entry
143289796 CDS
T11321
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143289796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
barl03041
]
143289796
Enzymes [BR:
barl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
143289796
Spliceosome [BR:
barl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
143289796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_19
AAA_22
nSTAND3
AAA_30
nSTAND_NTPase5
TsaE
Cas3-like_C_2
PWI
Flavi_DEAD
Polysacc_lyase_14
Motif
Other DBs
NCBI-GeneID:
143289796
NCBI-ProteinID:
XP_076455055
LinkDB
All DBs
Position
14:9974467..10001294
Genome browser
AA seq
1055 aa
AA seq
DB search
MALTERWVTDQLYDILGISDKYIAQYFIGLASKSSSAEDFVVKLKETQTVAVDANLTAFA
RDLYNRVPHKGKQVKQLTSEQREAIELEQKNRTYQLLDEDDDDDSDDVQPAPTKKMKVEK
KKRNLRRKQESSESSSESEMEQDRDRDATEESSSEDEMDREERERLTDLKERDEFAQRLR
DKDKEKTRNVTDKKGSKAYEEAKRRLEMEAEDRKKTIPDLRKKSRREYMKKRGADKLDDL
EAEIQDEEFLFGGERLTEKECKDLNYKKNVLKLAMEHRAAKEIERVDRYYLPKDDVKPQD
KYMEDATERGPNYEQRRWEEEHFHAGTLRFGAKDAGEKSKKSAKTYEVIMDDEIEFVQAL
KMPGTVKDKEKKDKSDSQPSALSLADHRREDMSEAELKRAQIEETQRSLPIYPFKKDLIA
AIREHQVLIIEGETGSGKTTQIPQYLHHAGFNKDGKKVGCTQPRRVAAMSVAARVSEEMG
WKLGNQVGYSIRFEDCTSERTILKYMTDGMLLREFLSEPDLAGYSVLIIDEAHERTLHTD
VLFGLVKDIARFRPDLKLLISSATLDAQKFSEFFDDAPIFRIPGRRFPVDIYYTKAPEAD
YLDAAVVSVLQIHVSQPPGDILVFLTGQEEIETANEMLLERTRKLGGKIKELIILPIYST
LPSDMQAKIFEPTPPGARKVVLATNIAETSLTIDGIVYVIDPGFSKQKSYNARTGMESLV
VTPISKASSNQRAGRAGRVAAGKCFRLYTAWAYKNELEDNTIPEIQRTNLGNVVLLLKSL
GINDLIHFDFMDPPPHETLVLALEQLYALGALNHQGELTKLGRRMAEFPCDPMMSKMILA
SEKYKCSQEIITIAAMLSVNNAIFYRPKDKIVHADTARQNFFCPGGDHLTLLNVFNQWAD
TDFSTQWCYENFIQQRSMKRARDVRDQLEGLLERVEIAIVSNPGDTVAVRKAITAGYFYH
TARLSKGGQYKTVKHQQTVMVHPNSSLFEEHPRWLVYYELVFTTKEFMRQTIEIENQWLL
EVAPHYYRAKDLEDGSGKKMPKMAGKAKDDLTRKY
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgacagagagatgggtaacagaccaactatatgacattctgggcatatcagac
aagtacattgctcagtattttatcggactggcttccaagtcgagcagtgctgaggatttt
gttgtaaagttaaaagagactcagacggtcgctgttgatgccaacctgacggcgtttgcc
agagatctttataaccgagtgcctcacaaagggaaacaagtgaagcagttgacctcagag
caaagggaggccattgaactggaacagaagaacagaacctatcagttacttgatgaagat
gatgatgatgattctgatgatgttcaaccagcaccaaccaagaagatgaaggtggagaag
aagaagcgaaatctccggcgcaaacaagagagttcagagagtagcagtgagtcagagatg
gagcaagacagagacagggacgcgacggaggagagttcctcggaggacgagatggaccgg
gaggagcgggagaggctcacagacctcaaggagcgagacgagtttgctcagcgcctcagg
gacaaggacaaggagaagacacgcaatgtgaccgacaagaagggctccaaggcctatgag
gaggccaagcggaggctggagatggaggcggaggaccggaagaagacgattccagacctg
cggaagaagtctcgcagggagtacatgaagaagcgtggtgcagacaaactggatgatctg
gaggctgagatacaggacgaggagttcctgttcgggggggaacggctgacggagaaggag
tgcaaagacctcaattacaagaagaacgtcctcaagctggccatggagcaccgggcagcc
aaggagatagagcgcgtcgaccgctactacctgccaaaggacgacgtgaagccccaggac
aagtacatggaggacgccacagagcgcggccccaactacgagcagcgcagatgggaggag
gagcacttccatgccggcactctgcgcttcggtgccaaggacgccggggagaagagcaag
aagtcggccaagacgtacgaggtgatcatggacgacgagatcgagttcgtgcaggcgctg
aagatgccggggaccgtcaaggacaaggagaagaaggacaagtcggacagtcagccatca
gccctgtcactggcagatcaccggcgggaggacatgagcgaagcggagttgaagcgggca
cagatcgaggagacacagcgcagccttcccatctaccccttcaagaaggacctgatcgcc
gccatccgagaacaccaggtgctaatcatcgagggggaaactgggtccggaaaaaccacc
cagatccctcagtacctgcaccacgctggtttcaacaaggacgggaagaaggtgggatgc
acccagcctcgccgtgtggccgccatgtcagtggctgctcgtgtctccgaggaaatgggc
tggaaactggggaatcaggtgggctacagtattcgttttgaggactgcacgtcggagaga
accatcctcaagtacatgacggacggtatgctgctcagagagttcctcagtgaacctgac
ctggccggctacagtgtgctgatcatcgacgaggctcatgagcgcacactgcacacagac
gtgttgtttgggttggtgaaggacatcgctcggttccgccctgacctaaaactcctcatc
tccagtgccacgctggatgcacagaaattctctgagttttttgatgacgccccgattttc
cgcattcctggtcgtcgcttccctgtcgatatctactacacgaaggctccggaggcagac
tacctggacgcggcggtggtgtcggtgctgcagatccacgtctcgcagcccccgggggac
atcctggtcttcctcaccggccaggaggagattgaaacagccaatgaaatgctgctggag
cggacgcggaagctgggggggaagatcaaggagctgatcatcctgcccatctactccacc
ctgccctcagacatgcaggccaagatcttcgagcccaccccgcccggcgccaggaaggtt
gtgctggccacaaacatcgcagagacgtcactgaccattgacggcattgtgtacgtcatc
gaccctggcttctccaagcagaagagctacaatgccaggaccggcatggagtccctcgtg
gtcacccccatttctaaggcgtcgtcgaaccagcgggcggggcgggccgggcgggtggcg
gcagggaagtgcttccgtctgtacacagcctgggcctacaagaacgagctggaggacaac
accattcctgagatccagaggaccaacctgggcaacgtggtgctgctgctcaagtctctg
ggcatcaacgacctgatccacttcgacttcatggaccccccgccccacgagacgctggtg
ctggccctggagcagctgtacgcactgggcgccctcaaccaccagggggagctcaccaag
ctgggccgccgcatggccgagttcccctgtgaccccatgatgtccaagatgatcctcgcc
tctgaaaagtacaaatgctcccaggagatcatcaccatcgccgccatgctctccgtcaac
aacgccatcttctaccgccccaaggacaagatcgtgcacgccgacacggcgcggcagaac
ttcttctgccccgggggggaccacctgacgctgctgaacgtgttcaaccagtgggcagac
acagacttctccacgcagtggtgctacgagaacttcatccagcagaggtctatgaagagg
gccagggacgtcagggaccagctggaggggctcttggagcgggtggagatcgccatcgtc
agcaaccctggggacaccgtcgccgttaggaaggccatcacagcaggctatttttaccac
acggcacggctgagcaaagggggacagtacaagacggtgaagcaccaacagacggtgatg
gtgcaccccaactccagtctcttcgaggagcatccccgctggctggtctactacgagctg
gtcttcaccaccaaggagttcatgagacagacgatcgagatcgagaaccagtggctgctg
gaggtggcgccacactactaccgcgccaaggatctggaagacgggtctggcaagaagatg
cccaagatggccggcaaggccaaggatgacctcacccgcaagtactga
DBGET
integrated database retrieval system
