Babylonia areolata (ivory shell): 143289853
Help
Entry
143289853 CDS
T11321
Name
(RefSeq) superkiller complex protein 2-like isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143289853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barl03019
]
143289853
Enzymes [BR:
barl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
143289853
Messenger RNA biogenesis [BR:
barl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
143289853
mRNA degradation factors
3'-5' decay
Ski complex
143289853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
143289853
NCBI-ProteinID:
XP_076455159
LinkDB
All DBs
Position
14:complement(14437015..14504186)
Genome browser
AA seq
1251 aa
AA seq
DB search
MAETELTRGLDLLELGCQGHLELVTKDEKCVSRLPLKTIPVGLPPALPEIQDELEEYLTK
PECLSIHDFRRTQKYIPRERDPEALYLCDVCPLQTTIVVERNPATGHLLGYKEEYLPDSN
KTSRNSLSLRRAPGPAYSDVRGSAANMPFWPGGLEEPSLDKLDEEASSSTTLNFETDLLT
VAPGMLDGMTFANATKEATPTLPAEDSTSSDVINLADILAATDDLDLGDSDEEGTEEKGK
TEKDNEDTAALAQVGKSESLENLVQVEEKKVDQEAAPKRKAERKKEQWAVMVDVNTPVSN
FYKRVPDMAYKWPFEPDVFQKQAILHLERHESVFVAAHTSAGKTVVAEYAIALSLKHMTK
TVYTSPIKALSNQKFRDFKTTFGDVGLITGDVQINTTAACLIMTTEILRSMLYNGSDVIR
DLEWVIFDEVHYINDAERGVVWEEVLIMLPQHVNIILLSATVPNTMEFADWIGRTKRKHI
YVISTTKRPVPLEHYLYTGNSNKTSSELFLLLDAKGSFLTAGYNKAVAAKKERASQSSQN
FGAKGTRGGNPHQDKNVWLSVIEMLKKKDKLPMVAFVFSKRRIEDNIFNLQSVDLTTQAE
KAEIHIFFHRCIQRLKGNDRQLPQVLHMENVLKRGLGVHHSGILPILKEVVEMLFQRGLV
KILFATETFAMGVNMPARTVVFDSIKKHDGTSLRTLLPGEYIQMAGRAGRRGLDTTGTVI
ILCKGDVPETSELHKMMLGRPTQLESQFRLTDTMILNLLRVEQLRVEDMMRRSFSEFHAQ
RHQGSHRQAMDDLKGRIAQVKDIECYMCSEDLEPYYRACKEYQELKRTLQEVVLSHPAAI
KSLSAGRVVVINNSHHSNVLAVVLQSSMGSNNMRTFTVLLICNKGHNSDAREATPATNDD
MKVTPMKALSLFIPEGVCWHDLVEVTAAQISLITTTTIKVEADKIIKDVKKRQQPRFKDD
PPSQSVTVATQELLRLSEKNPGGLKGLDPVKDLNLRDIDLVEQFRSLRFMEEGIGQFQCV
HCAKFEEHFTQLSHNMGLKEEYRRLQFLLSDQSLQLLPEYHQRMEVLRALNYIDDHNAVQ
LKGRVACEISNHELMITELVFENVLTELHPTDIAAILSCMVFEQKHCSDPELSKTLEEGK
QKVLSKAEQIGGLQKEAGMKVAVGDYKDMFHFGLMEVVFEWARGMPFSEITALTDVQEGI
IVRCIQRLYELLRDVRNAARIIGEPVLFNKMEECMTLIKRDIVFAASLYTQ
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacagaactgacaagaggccttgaccttttggagttggggtgtcaaggtcac
ttggagcttgtaacgaaggatgaaaagtgcgtctcacgtctgccgctgaaaacaattcca
gtgggcttaccccctgcgctgccagagatccaggatgaactggaagagtatttaacaaag
ccagagtgtctgagcatccatgacttcagacggactcagaagtacattccccgcgaaaga
gaccctgaggcgctgtacctgtgtgacgtctgtccactgcagaccaccatcgtggtggag
agaaatcctgccactggtcacctcctaggatacaaagaggagtacttgccagacagcaac
aagacgtccagaaattcactgtccctgcgcagggccccaggaccggcctacagcgacgtg
aggggttcggcggccaacatgcccttctggcccggggggctggaggaaccgtcactggac
aaacttgatgaggaagcctccagttccacaactctcaattttgaaacagacctgctgact
gtggcaccagggatgctggacggtatgacctttgccaatgccaccaaagaagccacgccc
actctgcctgcagaggacagcaccagcagtgatgtcatcaacctggcggacattttggcg
gccactgatgaccttgaccttggcgacagtgatgaggaggggacggaggagaaaggaaag
actgagaaggacaatgaggatacagctgctttggcccaggtcggcaaaagtgagagtctg
gaaaaccttgtacaggtggaagagaagaaggtagaccaggaagcagcgcccaagaggaag
gcagagagaaagaaagagcagtgggcagtgatggtggacgtcaacacgcccgtctccaac
ttctacaagcgagtccctgacatggcctacaagtggccgtttgaaccggacgtcttccag
aagcaggccatcctgcacctggagagacacgagagcgtgtttgtggccgcacacacctcc
gcagggaaaaccgtggtcgccgagtacgccatcgctctctccctcaagcacatgacgaag
actgtgtacacgtcgcccatcaaggccttgtccaatcagaagttccgtgactttaagacc
acgtttggagatgttggcctcatcactggcgatgttcagatcaacaccacggctgcctgt
ctgatcatgacgacagagattttaaggtctatgttatacaacggatctgatgttattcga
gatctggagtgggttatttttgacgaggtgcattacatcaatgatgctgagaggggggtg
gtgtgggaggaggttctcatcatgctgccccagcacgtcaacatcatcctgctcagcgcc
actgtccccaacaccatggagttcgctgactggatcgggagaacaaagcggaagcacatc
tacgtgatcagcacgaccaaacgcccggtgcccctggagcactacctgtacaccggcaac
agcaacaagaccagctctgaactcttcctgctgctggatgccaaggggagcttcctcact
gctggctacaacaaggcggtggccgccaagaaagagcgtgccagtcaaagctcccagaac
tttggcgccaagggcaccaggggaggtaacccacatcaggacaagaacgtgtggttgtca
gtgattgagatgctgaagaagaaggacaagctgcccatggtggcgtttgtcttctccaag
aggcgcatcgaggacaacatcttcaacctgcagagcgtggacctgaccacacaggcagag
aaagcagagatccacatcttcttccaccgctgtatccagcgcctcaaggggaatgaccgc
cagctgccgcaggtgcttcacatggagaacgtgctgaagagaggactgggggtgcaccac
agcggcatcctgcccatcctcaaggaggtcgtggagatgctgtttcagcgggggcttgtc
aagatcctgtttgcgacggagacgttcgccatgggggtgaacatgccggctcgcacagtg
gtcttcgacagcatcaagaagcacgatgggacgagcctgcgcaccctgctgccgggggag
tacattcagatggcagggagggcaggtaggcgtgggctggacaccacgggcaccgtcatc
atcctgtgcaagggggacgtgcctgagacatcggagcttcacaagatgatgctgggaagg
cccacccagctggagtcgcagttccggctgacagacaccatgatcctcaacctgctgcgg
gtggagcagctccgcgtggaggacatgatgcgtcgcagcttctccgagttccacgcgcag
cgccaccagggcagccaccgccaggccatggacgacctcaagggtcgcattgcccaggtc
aaggacatcgagtgctacatgtgctcagaggacctggagccctactaccgggcgtgcaag
gagtaccaggagctgaagagaacgctgcaggaagttgtgctgtctcacccagctgccatc
aagtctttgtctgccggacgagtggttgttatcaacaacagtcaccatagcaacgtcctg
gccgtcgtccttcagagcagcatgggaagcaacaacatgcgcaccttcaccgtcctgctt
atctgcaacaagggccacaactctgatgcaagggaagctactcctgccactaatgatgac
atgaaggtgacacccatgaaagctttatcgctgttcattccagagggggtgtgctggcat
gaccttgtggaggtcactgccgctcagatctccctcatcaccacaacgaccatcaaggtg
gaagctgacaaaattatcaaggacgtcaaaaagcgacagcagccgcgctttaaggacgac
ccgccctcccagtcggtgacggtggccacgcaggagctgctgcgtctgtcagagaagaac
cccgggggcctgaagggactggacccggtcaaggacctgaacctgcgtgacattgacctt
gtggagcagttccgctctctgcgcttcatggaggagggcattggccagttccagtgtgtg
cactgcgcaaagtttgaggagcacttcacacagctgagccacaacatgggtctgaaggag
gagtaccgacgcctgcagttcctgctgtctgaccagagtctgcagctgctgcctgagtac
catcagaggatggaggtgttgcgagcgctgaactacattgacgaccacaatgcggtgcag
ctgaagggccgagtggcctgtgagatctccaaccacgagctgatgatcacggagctggtg
ttcgagaatgtgctgacggagctgcaccccactgacatcgctgccatcttgtcctgcatg
gtctttgaacagaagcactgctccgaccccgagctgtccaaaacgctggaagagggcaag
cagaaggtgctgtccaaagcagagcagataggtggcctgcagaaggaagctggcatgaag
gttgctgtgggcgactacaaggacatgtttcatttcgggctgatggaggtcgtctttgag
tgggcgagaggaatgccgttctccgagatcacggccctgacagacgtccaggaaggaatc
atcgtgcgctgcatccagcgcctctatgagttgctgcgagatgtgaggaatgccgcccgc
atcatcggcgaacccgtcctcttcaacaagatggaggagtgcatgactttgatcaagcgg
gacatcgtcttcgctgcaagtctctacacgcagtga
DBGET
integrated database retrieval system
