Babylonia areolata (ivory shell): 143293372
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Entry
143293372 CDS
T11321
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
barl
Babylonia areolata (ivory shell)
Pathway
barl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143293372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
barl03041
]
143293372
Enzymes [BR:
barl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143293372
Spliceosome [BR:
barl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
143293372
Complex B
143293372
Complex C
U2 SnRNP specific factors
143293372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Mpp10
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
143293372
NCBI-ProteinID:
XP_076460295
LinkDB
All DBs
Position
19:2037904..2076075
Genome browser
AA seq
779 aa
AA seq
DB search
MFHRGGDGKAKGFGFEGFGFVKSSQSSGSSSSSQASQPLTPASGFAAMSMGMGSTGTYKF
GAPGRTLGYHTNLGKRRVRSEEEYFEDDEDEEPVSKMAYQPAPGSPGDQGNDTDDSEDAL
DAYMAGLEKEITEAKEVEATDDGKKKAEKGVRDDIDKEDEMEEYLRYMEENPNAGVIADE
EDDIQYDSDGNPIPGERSKIIDPLPPIDHSDIDYESFERNFYEEHEEIKALSTQQVDELR
RTLGIKVSGLDPPKPVSSFGHFGFDEKLLTSVRKSEYTQPTPIQAQGIPIAMMGRDIIGI
AKTGSGKTAAFVWPLLIHIMDQRELKPGDGPIGLILAPTRELSQQIYQEARKFGKVYNIK
VVCAYGGGSMWEQSKACQEGAEIIVATPGRLIDLVKKKAVNLERVTFLVFDEADRMFDLG
FEPQVRSIADHVRPDRQTLLFSATFRKRVEKLARDILVDPVRVVQGEVGEANEDVTQFVQ
ILPSNGPAKWTWLVRRLVEFTSVGSVLIFVTRKANSEELATQLRARDFKLGLLHGDISQM
ERNDIISAFKRKDFPILVATDVAARGLDIPHIRTVVNYDVARDIDTHTHRIGRTGRAGEK
GSAYTLITDKDKDFAPLLVRNLEGANQIPPPALLDLASQCPWFNKTRFKRGKGKFMGGRA
LGVKERPGLGSETATQLQDSTSFSGFRSSGVLGGGPGSDRLSTMRTAFAAQFKSCFVGAS
QEEKKLPTGIILPPVSQNKDGKTQEPIHMQPTSTRSDHHSSSASSSSDSGKKKRKSRWD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgttccacagaggtggagatggaaaggctaaaggtttcgggttcgaaggctttggcttt
gtgaagtcttcacaaagttctggttccagttcatcgtctcaggcatcccagccattgaca
ccggcatctggattcgctgccatgtcaatgggaatggggagtactggcacatacaagttt
ggagctccgggccgcacattgggttatcacaccaatttgggcaagcgtcgtgtccggagc
gaagaagaatactttgaggatgacgaagatgaggagcccgttagcaagatggcctatcag
ccagctccaggcagccccggggaccaaggcaatgacaccgatgattcagaagatgctctg
gatgcttacatggctggactggaaaaagagatcacggaagcaaaggaagttgaagccact
gacgatggaaagaagaaggcagagaaaggtgtgcgtgacgacatcgacaaggaggacgag
atggaggagtacttgaggtacatggaggaaaaccccaacgccggggtgattgctgacgag
gaagacgacattcagtatgacagcgatggcaatcccatcccaggggagcgcagcaagatc
attgacccgctgcctcccatagatcactctgacatcgactatgagtcctttgagcgcaac
ttttatgaggagcatgaagagatcaaggcactgagcacgcagcaggtggatgaactcaga
cggaccttagggatcaaggtgtccggtcttgatcctcccaagccagtgagcagctttggt
cactttgggtttgacgagaaacttctgacctctgtgcgcaagtcggagtacactcagccc
actcctatccaggcacagggtattcccattgccatgatggggcgtgacatcattggcata
gccaagacaggtagtggaaaaacagcagccttcgtgtggcctctgctcatccatatcatg
gaccagagagagctgaagccgggagatgggcctatcggtttgatcctggctcctactcga
gagttgtcacaacagatttaccaggaagccaggaagttcggcaaggtgtacaacatcaag
gtggtgtgtgcctatgggggtggtagcatgtgggagcagtccaaagcctgtcaggagggg
gcagagatcatcgtggccacgccgggtcgactgatcgaccttgtcaaaaagaaagccgtc
aacttggagcgagtgacattcttggtgtttgacgaggctgacagaatgtttgacctgggc
tttgagcctcaggttcgatccattgctgaccatgttcgtcctgacagacagaccctgctg
ttcagcgccacattccggaagagagtggagaagctggcccgagacatcctggtggaccca
gtcagggtggtgcagggagaggtgggagaggccaacgaagacgtgacacagttcgtgcag
atattacccagcaatggcccggccaagtggacatggctggtgcgacgtctggtggagttc
acctcagtgggcagtgttttgatctttgtgacaagaaaagccaactctgaagaacttgca
acacagttgagagcccgtgatttcaaactgggcctgctgcatggtgacatcagccagatg
gagaggaacgacatcatctccgccttcaagaggaaggacttccccatcctggtggccacc
gacgtggcagctcggggtctggacatccctcacatccgcactgtggtgaactacgatgtg
gctcgtgacatcgacacacacactcacaggattggccgaactgggcgtgcaggggagaag
gggtctgcgtacaccctgatcacggacaaggacaaggactttgctcccctgttggtgagg
aacctggagggggccaaccagatccctccccctgccctcctggacctggccagtcagtgc
ccatggttcaacaagacgcggttcaagaggggtaaagggaagttcatggggggacgggct
ctgggagtgaaggaacggcctggtctgggatcagaaactgccacccagctccaggacagc
accagtttctcagggttcaggtccagcggagtgctgggcgggggacctggcagtgatcgc
ctcagcaccatgcgcactgccttcgctgcccagttcaagtcgtgcttcgtgggggccagc
caggaggagaagaagctgccgacgggcatcatcctgccccccgtgtcgcagaacaaggac
ggcaagacccaggaacccatccacatgcagcccacctccacccgctctgaccaccactcc
tcctccgcctcctcctcctccgacagcggcaagaagaaacgcaagagtcgatgggattaa
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