KEGG   Babylonia areolata (ivory shell): 143293460
Entry
143293460         CDS       T11321                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
barl  Babylonia areolata (ivory shell)
Pathway
barl03030  DNA replication
barl03410  Base excision repair
barl03420  Nucleotide excision repair
barl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:barl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    143293460
   03410 Base excision repair
    143293460
   03420 Nucleotide excision repair
    143293460
   03430 Mismatch repair
    143293460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:barl03032]
    143293460
   03400 DNA repair and recombination proteins [BR:barl03400]
    143293460
Enzymes [BR:barl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     143293460
    6.5.1.6  DNA ligase (ATP or NAD+)
     143293460
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     143293460
DNA replication proteins [BR:barl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    143293460
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     143293460
DNA repair and recombination proteins [BR:barl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     143293460
   NER (nucleotide excision repair)
    Other NER factors
     143293460
   MMR (mismatch excision repair)
    Other MMR factors
     143293460
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 143293460
NCBI-ProteinID: XP_076460454
LinkDB
Position
1:72037541..72101648
AA seq 1027 aa
MQKSIRSFFTPSVKPKQDDSASDTPQKVATKSPVKTPMRQKNSPPEKQTEADSPVKRTRQ
KKARIIDSDDEDVSGSENGSPVSDVPPEKLVVESETTPVKEHASKRKAKALASDDEEESA
TKKKKVETKNGVDKQDFDKSKDEPTTLVTGTQIGWETEQFTPDRSPPLHSIPKRKTARKS
VKGEDPLKKKKDLEAARRQLTAEEPKKQESAESNEDEIKSTKEPAEKKIKAEKTEEDESM
EISSAEEDTKLDVKEKSKQKGDEAKKQTKAKKSDKKEDKSNKKSVANKDEVEKKSDKAED
KKASSVHSFFAPRKATPKTMERKAESDKDSPKTSKEDKPEVKKSADSAKPVSSFFKPASD
IKSEAKGVTDTTYEPSKSKYHPITDACWKHGEKVPYLALSKTFEAIEATSARLQMIEILC
NFLRSVIALSPQDLLQCVYLCLNKLAPAYKGVELGIGDTVLMKAIAQATGRTVDKLKADV
QEKGDLGIVAESSRSNQRMMFAPPKLTVASVFSRLKEIAEMTGSAVMSKKIEKIKGMFVA
CRQSEARYLIRSLSGKLRIGLAEQSVLTALGHAAFLTPPGQEFPPEIVDAKKGLGADAAK
KKMEEAAMIIKTTYCELPSYDSIISTLLEHGLQELPEHCKLTPGIPLKPMLAHPTKGVSE
VLRRFENMDFTCEYKYDGERAQIHVLEGGQIHIYSRNSEDNTSKYPDIIGRMPKALGSEV
KSCVIDSEAVAWDSEKQQILPFQVLSTRKRKDADESQIKVKVCVYAFDLLYLNGESLVQK
PFRTRRQLLRDHFKEVEGEFVFAKSMISSNTEEIEEFLEESIKGNCEGLMVKTLDVDATY
EIAKRSHNWLKLKKDYVDGVGDTLDVVVIGGYVGTGKRTGKYGGFLLACYDEENEEFQSI
CKIGTGFKDEDLDKHSEFLKGHVLPQPRPYYCWDSAVEPDHWFDAVQVWEIKVADLSISP
THKAAMGLVDPEKGISLRFPRFLRIRDDKKPEEATSASQVADMYRSQQQIQNQHASSSKA
DDEEDFY
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgcagaaatcaatcagatcatttttcactccatcagtgaaaccaaagcaagatgactca
gcaagtgatacaccacaaaaggttgcaaccaaatctcctgtaaaaacacctatgcgacag
aaaaattctcctccagagaaacaaactgaagctgattcaccagtgaaaagaactcgtcaa
aagaaagccaggattattgacagcgatgatgaagatgtcagcggatcagaaaatggatct
cctgtctcagatgtaccccctgaaaaacttgttgttgagtcagagacaactccagtcaag
gagcatgccagtaaaagaaaggctaaagcattggcaagtgatgacgaagaagaatcagcg
acaaaaaagaagaaagtagagacaaagaatggagttgacaaacaagattttgataaaagc
aaggatgagcccacaaccctagttacaggaacacagattggatgggaaacagagcagttc
acaccagacagatcaccgcctctgcattccatacctaagaggaagacagcaagaaaaagc
gtgaagggtgaggacccactcaagaaaaagaaagaccttgaagcagccagaagacagtta
acagcagaggaacctaagaaacaagaatcagctgagagtaatgaggatgagataaagtcc
acgaaagaacctgcagaaaagaagatcaaggcagaaaaaacagaagaggacgagtctatg
gagatctcatcagcagaggaagataccaaactggatgtgaaagaaaaaagcaaacagaaa
ggagacgaggcaaaaaagcaaacaaaagccaaaaagtcagataagaaagaggacaaatcc
aacaagaaatctgttgccaacaaagatgaggttgagaagaagtctgacaaggcagaggac
aagaaggcatcttctgttcacagcttcttcgctcccaggaaagccacccctaaaacaatg
gaaaggaaagcagagagtgacaaggacagccccaaaacctccaaagaggacaagccagaa
gtgaaaaagtctgcagactctgcgaagcccgtcagtagcttcttcaagccagcaagtgac
attaaatcggaagcgaaaggagtgactgacacgacctatgaacccagcaaaagcaagtat
caccccattactgatgcctgctggaaacatggagagaaggtaccatatttggctctgtca
aaaacctttgaagccattgaagctacatctgcgagattgcagatgatagagatcctgtgc
aacttccttcgctctgtgatagccctgtctccccaagatctcctgcagtgtgtttacctg
tgtctcaacaaactggcacctgcctacaagggggtggagctgggtattggtgacactgtg
ctcatgaaggccattgcccaggccacaggtcgcactgtggacaagctgaaagccgatgtt
caggagaaaggggacctgggtattgtagcagagagtagtcgcagtaaccagaggatgatg
tttgccccaccaaagttgactgtggccagtgtgttctccagactgaaggagattgctgaa
atgactggcagtgcagtgatgtccaagaaaatagagaagatcaaggggatgttcgtggcg
tgtcgccagtcagaggcacgttacctgatccggtcgctgagcggcaagctgcgcatagga
ctggcagaacagtctgtgttgacagcgctgggccatgctgctttcctcaccccccctggc
caagagttccctccagaaattgtggatgccaagaaaggattgggagctgatgctgccaaa
aagaaaatggaagaagctgcaatgatcatcaagacgacctactgtgagttgccaagttat
gactccatcatcagtacccttcttgagcatggtctgcaagagttgcctgagcattgtaaa
ctgaccccaggtattcctctgaagcccatgctggctcacccaaccaaaggagtcagtgag
gtgctacgacgttttgaaaacatggacttcacctgcgaatataaatatgatggagagcgt
gcacagattcatgtcttggagggtggacagatccacatctacagtcgtaactcggaggac
aataccagcaagtatcctgacatcattggccgcatgccaaaagccctgggcagtgaggtg
aagtcgtgtgtcattgactctgaggctgtggcctgggacagtgagaaacagcagatcctg
cctttccaggttctcagcacacgcaagagaaaggatgccgatgagagccagatcaaggtg
aaggtgtgtgtctacgcctttgacctgctgtacctgaacggggagtcgctggtgcagaaa
ccgttccgcaccagacggcagctgctgcgagaccacttcaaagaggtggagggggaattt
gtgtttgccaagtccatgatctcctccaacactgaggagattgaagagtttctggaggag
tccatcaaaggaaactgtgagggacttatggtcaagacactggatgtggatgctacttat
gaaattgccaagcgatcccacaattggctgaagttgaagaaagattatgtggatggagtg
ggtgacacactggatgttgtggtcattggcggttacgtgggcactggcaaacgtacaggc
aaatatgggggcttcctactggcctgctatgacgaggagaatgaggagttccagtccatc
tgcaagattggcacaggattcaaggacgaagacctggacaaacactcagagtttttaaag
ggccacgtgctgccacagccgcggccgtactactgctgggattcagcagtcgagccggac
cactggttcgatgccgtgcaggtgtgggagatcaaggtggctgacctgtccatctccccc
acacacaaggcggccatgggactggttgatccagagaaagggatttctcttcggttccct
agattccttcgtatccgtgatgacaaaaaaccagaggaggcaacgagtgcatcgcaggtg
gctgatatgtaccgaagccagcagcaaatccaaaaccagcatgcatccagcagtaaagct
gatgatgaggaggacttctactag

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