Babylonia areolata (ivory shell): 143293550
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Entry
143293550 CDS
T11321
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143293550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
barl03041
]
143293550
Enzymes [BR:
barl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
143293550
Spliceosome [BR:
barl03041
]
Complex C
Other components
Step II factors
143293550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
DEAD
GIPC1_GH2
AAA_22
AAA_19
nSTAND3
AAA_16
ABC_tran
PhoH
Motif
Other DBs
NCBI-GeneID:
143293550
NCBI-ProteinID:
XP_076460598
LinkDB
All DBs
Position
19:complement(24028230..24052585)
Genome browser
AA seq
1286 aa
AA seq
DB search
MDADELQKLEYLSLVSKVCTELENHLGINDKDLAEFVIHLAEENGTFEKFKKALEEKDAQ
FSDSLIANLLRLIKKMKPKSKPKKKKKSKEATWDEREAEEENKKSNIDINKQLFPALAMP
NDPKVRSMLDNEKKPQKLEEEPAVEVKEEKPPTGTVGKEGSSEDAQIASEMMGELEALLA
GGPPPSSKAKKRSRSRSKSRERDRKKEKKKRRHRSRSRSDSKGRSRSRSRSRSRDRSRRH
RRSRSRSRDKDRNRDRDYRRDRDRRDRDEDRKDRDRRDRDEDRKDRDRRDREEDRKDRDR
YTRDGNRAKRHNDQYNDIPLEPIVGQIYCGKVTTIMQFGCFVQMEGLRKRWEGLVHVSQL
RREGRVTNVGDVVTRGQKVWVKVLSFTGQKTSLSMKDVDQESGEDLNPQHTRSIVGGEVK
GDEDTARNPDRPSTLPLVNAPEVDDQGEVRTFKRISSPERWELKQMMAANAIDISELPDF
DEETGLLPKQDDSDEDMEVEIVEEEPPFLQGHGRHWVDLSPVKIVKNPDGSLAQSAMMQS
ALQKERRELKQAQREAEADAVPPGLNNQWIDPMPDADGRKVAAAVRGIGMVPTELPEWKK
QVMGGAKASFGKKEKKSLLEQRQGLPIYRLKDELLKAVHDNQILIVIGETGSGKTTQITQ
YLAESGYTTRGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKY
MTDGMLLRECLIDGDLMQYSIIMLDEAHERTIHTDVLFGLLKQAVKKRPDLKLIVTSATL
DAVKFSQYFFEAPIFTIPGRTYPVEILYTKESETDYLDASLITVMQIHLTEPPGDVLLFL
TGQEEIDTACEILYERMKALGPEVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATN
IAETSLTINGIYYVVDPGFVKQNVYNSKTGMDQLIVTPISQAQAKQRAGRAGRTGPGKCY
RLYTERAYRDEMLPTNVPEIQRTNLASTVLSLKAMGINDLLAFDFMDAPPMQTLISAMEQ
LHALSALDDEGLLTRLGRRMAEFPLEPMLSKMLIMSVHLACSDEILTVVSMLSVQNVFYR
PKDKQALADQKKAKFHQPEGDHLTLLSVYNSWKNNKFSSPWCYENFVQIRTLKRAQDVRK
QMLGIMDRHKLDVVSCGKNTARVQKAICSGFFRNAAKKDPQEGYRTIVDAQVVYIHPSSA
LFNRQPDWVIYHELVLTTKEYMREVTAIDPKWLVEFAPKFFKFSDPTRLSKQKKQQKIEP
LYNKYEEPNSWRISRAFRKFHTKVTF
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgacgaacttcagaaacttgaatacctttcgctggtgtcgaaagtgtgtact
gaacttgagaatcacttggggatcaacgacaaagacttagcggagtttgtcatccacctg
gctgaagaaaatggaacttttgaaaaattcaagaaagcccttgaggagaaagatgcacag
ttttctgattccttgattgccaacttgctgcgtctcatcaagaagatgaagccaaaatca
aagccgaagaagaaaaagaagtccaaggaagccacatgggatgagagggaggcagaagag
gagaacaagaagagcaacattgacatcaacaaacagctctttccagccctcgccatgccg
aacgaccccaaagttaggagcatgttggataacgaaaagaaaccacagaaacttgaggaa
gagccagcggtggaagtgaaggaggagaagcctcccacaggtactgtgggtaaagagggc
tcaagtgaagacgctcagattgcctcagagatgatgggggagctggaggcattgctggct
gggggaccccctcccagcagcaaggcaaagaaaaggagtcgcagcaggagcaaaagcaga
gaaagagacagaaaaaaggagaaaaagaagagaagacacaggtcaagaagccggtcagac
agcaagggcagatctcgcagccgatccagatccagatccagggatcgcagtagacgacac
agacgcagccgttctcggagcagagacaaagacagaaatcgagacagagattacaggaga
gacagagatcgacgagatcgagatgaggataggaaggacagagatcggcgagatcgagat
gaagacagaaaagacagagatcggcgagatagagaagaggacagaaaagacagagaccgt
tacacgcgagatggtaaccgtgcaaagcgacacaatgaccagtacaatgatatacctttg
gagcccattgtaggacagatttactgtggaaaagtgacgaccatcatgcagtttggatgt
ttcgtccaaatggaaggactgaggaaacgctgggagggactggtgcatgtgtcgcagttg
cgtcgcgaaggtcgtgtgacgaatgtgggtgacgtggtgacgaggggtcagaaggtgtgg
gtcaaggtgctgtccttcaccggtcagaaaaccagtctgtccatgaaggatgtggaccag
gaaagtggggaggatttgaacccccagcacactcgcagcattgtgggtggggaggtgaaa
ggggacgaagacacggcccgtaaccctgaccgcccatccaccctgccactggttaacgcc
cctgaggtggacgaccagggagaggttcgaaccttcaagcgtatctcttccccggagcgc
tgggagctgaaacagatgatggccgccaacgccattgacatctcggagttgccggacttt
gatgaggagacagggctgctgccaaagcaggatgattctgatgaggacatggaagtggag
atagtggaggaagaaccaccgtttctccaaggtcatggtcgtcactgggtggatctgagt
cccgtcaagattgtcaagaaccctgacggctccttggcccagtcagccatgatgcagagt
gcactgcagaaagagaggagagagctgaagcaagcccagcgagaggcggaggctgatgct
gtaccaccaggactcaacaaccagtggatcgaccccatgcctgacgcggatggacgcaaa
gtggcagcagcggtgagggggatcggcatggtgccgacagaactgcccgagtggaagaag
caggtgatgggcggggccaaggcgtcctttggaaagaaggagaaaaagtccctcctggag
cagcgacaggggctgcccatctacaggctgaaggatgagcttttgaaggcggtgcacgac
aaccagatcctgattgtgattggggagacggggtccggcaagacgacacagatcacccag
tacctggcggagagtggctacaccacgcggggcaagattggctgcacacagccccgtcga
gtggctgccatgtccgttgccaaacgtgtgtctgaagagtttgggtgtaggctgggacag
gaggtgggctacacgatccgttttgaggactgcaccagcccggagacgaagatcaagtac
atgacggacggtatgctgctgagagagtgtctgatcgacggggacctgatgcagtacagc
atcattatgctggacgaggcccacgagagaaccatccacactgacgtcctctttgggctc
cttaaacaggcagtgaagaagcgaccagacctgaagctgattgtgacctcagccaccctg
gatgctgtcaagttctcccaatatttctttgaagctcccatttttacaatccctggacgc
acataccctgtggagattctgtacaccaaagagtcagagacagactacttggatgcttca
ctgatcaccgtgatgcagatccacttgaccgagccaccaggtgacgtgttgctgttcctg
acgggtcaggaggagatcgacacggcctgtgagatcctgtatgaacgcatgaaggcgctg
ggacctgaggtgccagagctgatcatcctccctgtatactccgccctcccctccgagatg
cagacacgcatctttgaacccgccccgcccggctccaggaaggtggtgattgccaccaac
attgcggagacatcgctgaccatcaacgggatctactatgtggtggacccaggctttgtc
aaacagaatgtctacaactccaagactggcatggaccagctcatcgtcacacccatttct
caggcccaggccaagcagagggcgggcagggcagggcgcacagggcccggcaagtgctac
cggctgtacacggagcgggcataccgcgatgagatgctgccaaccaacgtgccagagatc
cagcgcaccaacctggccagcacagtgctctccctcaaggccatgggcatcaacgacctg
ctggccttcgacttcatggacgccccgcccatgcagaccctgatctcggccatggagcag
ctgcacgccctcagtgccctggacgatgaggggcttctcacgcgtctggggaggaggatg
gcagagttccccctggagcctatgctgtccaagatgctaatcatgtcagttcacctggcc
tgcagtgacgagatccttactgtcgtgtccatgctgtctgtacagaacgtcttctacaga
cccaaggacaagcaggccctggctgaccagaagaaagccaagttccaccagcctgagggg
gaccacctcaccctgctgtctgtctacaactcgtggaaaaacaacaagttttcctcgcca
tggtgctacgagaactttgtgcagatccgaactctgaagcgggcgcaggacgtgaggaag
cagatgttgggcatcatggacaggcacaaactggatgtggtgtcatgcggcaagaacaca
gcccgcgtgcagaaagccatctgcagtggcttcttccgcaacgcagccaaaaaagatcca
caggaagggtaccgcaccatcgtggatgcccaggtggtctacattcacccctcaagtgcc
ctcttcaacaggcagccagactgggtgatctaccatgagttggtgctgaccaccaaggag
tacatgcgggaggtgacggccatcgaccccaagtggctggtggagtttgcccctaagttc
ttcaagttctcagaccccaccaggctcagcaagcagaagaagcagcagaagattgaaccc
ctgtacaacaaatacgaggaacccaattcgtggagaatctctcgagcattcaggaagttc
cacaccaaagtcacattctga
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