Babylonia areolata (ivory shell): 143293618
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Entry
143293618 CDS
T11321
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase-like
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143293618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
barl03041
]
143293618
Enzymes [BR:
barl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
143293618
Spliceosome [BR:
barl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
143293618
Complex C
U5 SnRNP specific factors
143293618
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
143293618
NCBI-ProteinID:
XP_076460821
LinkDB
All DBs
Position
19:31109293..31164608
Genome browser
AA seq
2144 aa
AA seq
DB search
MADATARSLQYEYKANSNLVLSVDRSLIDRRARDEATGEVMSLVGKLTGTRMGDKSQKTK
PPLMEERKNKRRKRDEAQHDMVKMKGTTLLTSGIDEMVGIMYRPKTVETRQTYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNDRMKEKEKKKDVEAMLGPTPDERFALLVNLGRKIT
DWGQEDRAPTTDNIDETYGVNVQFEESDDDDAADVYGEVQEDEDDENEGEEAAIDATLHA
NLSEEARNKSEGGLHPRDIDAFWIQRKLSKYYPDDPTTAQTKAREVLEILKTAGDDRECE
NKLVMLLGVTQFEFIKVLRQYRQMILFCTLLASAQTAAERSKIEEQMEGDVELSRILHSL
QETDQDDLVTEERARRQQARQSRVAADLESMDVDEDVEVGPVQTLDLDDLTFTQGSHFMA
NKRCQLPDGSFRKQRKGYEEVHVPALKPKPFDDDESLVPIDRLPKYAQPAFDRFKSLNRI
QSRLFKAAMETDNNLLLCAPTGAGKTNVAMLCIMHEIGKHVNADGTINTDDFKIIYIAPM
RSLVQEMVGNFTMKLQSYGIKVAELTGDHQLTREQVNETQIIVCTPEKWDIITRKGGERT
YTQFVKLMIFDEIHLLHDDRGPVLEALVARAIRNIETTQEDIRLVGLSATLPNYEDVANF
LRVDPKEGLFFFDNSFRPVPLEQQFIGITEKKAVKRFQLMNDIVYEKVIEHAGKNQVLVF
VHSRKETGKTARAIRDMCLEKDTLGLFLKEGSMSTEVLRREAEQVKNHELKDLLPYGFAI
HHAGMTKVDRTLVEDLFNDRHVQVLVSTSTLAWGVNLPAHTVIIRGTQIYSPEKGRWVEL
SGLDVMQMLGRAGRPQYDTKGEGIMITNHGELQYYLSLMNQQLPIESQFISKLADNLNAE
IVLGTVQNVKEAVDWLGYTYLYIRMLRNPTLYGISHDQVREDPFLQQRRKDLIHTAACAL
DRNNLVKYDRKTGHLQVTELGRIASHYYCTSESMATYNQLLKPTLSEIELFRVFSLSSEF
KYITVREEEKLELLKLLERVPIPIKESIEEPSAKVNVLLQAYISQLKLEGFALMVDMVFI
TQSAGRLVRALFEIVLYRGWAQLADKALALCKMVNKRMWQSMSPLRQFRRIPEEVVRKIE
KKNFPFERLYDLNHNEIGELIRTPKMGKTIHKYVHQFPKLELSVHVQPITRSTLRVELTV
TPDFQWEEKVHGNSEAFWILVEDVDSEVVLHHEYFLLKSKFAKDEHTVKFFVPVFEPLPP
QYFIRVVSDTWIGSETQLPVSFRHLILPERYPPPTELLDLQPLPVSALRNPAYEALYSEH
FPFFNPIQTQVFNSVYNSDDNVFLGAPTGSGKTICAEFAILRMFTQNADGRCVYIAPLDA
LAQQVYTEMHNKFAGQLGKKVVLLTGETGTDLKLLAKGNIVISTPEKWDVLSRRWKQRKN
VQNVSLFIIDELHLIGGEVGPVLEVICSRMRYISSQLERNIRIVALSSSLSNARDVAQWL
GCGTTAFFNFHPNVRPVPLELHIQGFNISHNASRIIAMGKPAYQAVMRHSPRKPVVLFVP
SRKQTRITAIDVLTYAAAELQGATDDKVQSRFLHVTEDDLTPFLDKISDMTLKETLASGV
GYLHEGLSESERTIVEQLFNSGAVQVIVATRGLAWGMAAAAHLVIVMDTQYYDGKTHSYE
DYPVTDVLQMIGRANRPLHDQEGKAVIMCQSSKKEFFKKFLFEPLPVESHLDHCLHDHFS
AEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGVSHRHLSDHLSELVENTINDLE
QSKCISVEDDMDVAPLNLGMIAAYYYINYTTIELFSMSLNNKTKIKGLLEIVANAAEYKD
LPIRHGETDILRQLAGRLLNKQAAPKFNDPHTKTNLLLQAHLSRMQLSAELQSDTEEILS
KAIRLIQACVDVLSSNGWLSPALAAMELAQMTTQALWNKDSYLKQLPHFSQDIIKRCQEK
SLETIFDIMEMEDDERNELLQLTEAQMADVARFCNRYPNIELTYEVQEKENIRSGSTVNV
VVTLEREDEVTGPVIAPFFPQKREEGWWVVIGDSKNNSLLSIKRLTLQQKAKVKLDFLAP
SVGRHTYTVYFMSDSYMGCDQEYKINIDVKEGGESSDESGSESN
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgccacggctagatcccttcagtatgagtacaaagcgaactctaaccttgtg
ttgagtgttgatcgctcactgattgatcgacgagctcgagatgaagccactggagaggtg
atgagtctggtggggaagctgaccggaacacgtatgggtgacaaatcacagaaaaccaaa
ccaccactgatggaagagagaaagaacaaacgtcggaagcgtgacgaggctcagcatgac
atggtgaagatgaaaggcaccaccctgctgaccagtggcattgatgagatggtgggcatc
atgtaccgtcccaagacagtggaaaccagacagacgtatgaagtactgctcagcttcatt
caggctgcacttggagatcagccacgagacattttgtgtggtgctgctgatgaggtactt
gctgttctgaagaacgaccgaatgaaagagaaggaaaagaagaaggatgtggaagccatg
ttggggcctacgcctgatgaacgttttgctctgcttgtcaacttgggccgcaaaatcact
gattggggacaagaagatcgagcaccaacaactgacaacattgatgaaacatatggtgtg
aacgttcagtttgaggaatctgacgatgatgatgctgctgatgtgtatggtgaagtccag
gaagatgaggacgacgaaaatgaaggagaggaagctgccattgatgctacgctgcatgcc
aatctgtcagaggaagcccgcaataaatctgaaggaggattacatccccgtgacattgac
gccttctggatccagcgcaaactgagcaaatactatcctgatgatcccaccactgcacag
accaaggcacgggaggtgctggaaatcctcaagacagctggtgatgaccgtgagtgtgaa
aacaaactggtgatgctgcttggtgttacacagtttgaattcatcaaggttttgcgacag
taccgacagatgatcctgttctgcaccctgctggcctcggctcagacggcggccgagcgc
agcaagattgaggagcagatggagggggacgtggagctgtcacgcatcctgcattccctt
caggagacggaccaggacgacctggtcacggaggaacgggcacgacgccagcaggcgcga
cagtcacgcgtggccgccgacctggagtccatggatgtggatgaagacgtggaagtagga
ccagtgcagacactggacttggatgatctgaccttcactcaagggtcacacttcatggcc
aacaagcgctgccagctgcctgatggttctttcaggaaacagaggaaagggtatgaagag
gtgcatgtgccagctctgaagccaaaaccatttgatgatgatgagtcgctggtccccatt
gaccggctgcccaagtatgcgcagcccgcctttgacaggttcaagagtctgaaccgcatc
cagagccgactgttcaaggctgccatggagactgacaacaacctgctgctctgtgcaccc
accggtgcgggtaagaccaacgtggctatgctgtgcatcatgcacgagattggcaagcat
gtgaacgctgatggcacaatcaacacggacgacttcaagatcatctacattgcccccatg
cgctccttggttcaggagatggtgggaaacttcaccatgaaactccaatcatacggcatc
aaggtggccgagctgaccggggaccaccagctgaccagggagcaggtgaacgagacgcag
atcatcgtgtgcaccccggagaaatgggacatcattacccgcaaagggggcgagaggacc
tacacccagtttgtcaagctcatgatctttgatgaaattcatcttctacatgatgaccgt
ggccctgtgctggaagctttggtggcaagggccatccgtaacatagagacaacccaggaa
gacatccgcctggtgggtctgagcgccactctgcccaactacgaagacgtggccaacttt
ctcagagtggaccccaaggagggactcttcttctttgacaacagcttccgccctgtgcct
ctcgagcagcagttcatcggcatcactgagaagaaggccgtgaagcggtttcagctgatg
aacgacattgtgtatgagaaggtcattgagcacgccggcaaaaaccaggtcctggtgttc
gtgcactcacgcaaagagactgggaagacggcgagggccatccgtgacatgtgtctggag
aaagacaccctgggtctgttcctcaaggaggggtccatgtccacagaggtgctgcgcaga
gaggccgagcaggtcaagaaccatgagctcaaagacctgttgccgtacgggtttgccatt
catcatgctggaatgaccaaggtggatcgaacgctggtggaggacttgttcaatgaccgc
cacgtgcaggtgctggtgtcgacgtctacactggcctggggggtgaacttgccggcccac
acagtcatcattcggggcacgcagatctacagccctgagaaggggcgctgggtggagctc
agtggtctggatgtcatgcagatgttgggccgtgctgggcgtccccagtatgacacaaaa
ggggagggaatcatgatcaccaaccacggagagctgcagtattacctgtccctcatgaat
caacagcttcccattgagagccagttcatcagcaagctggcggacaacctgaatgcagag
attgtgctgggcactgtgcagaacgtcaaggaggcggtagactggctgggctacacgtac
ctgtacattcgcatgctgcggaaccccacgctgtacggcatctcgcacgaccaggtgagg
gaggacccttttctgcagcagcgccgcaaagacctcatccacactgcagcctgtgcactg
gaccgcaacaacctggtcaagtatgaccgcaagacagggcacctgcaggtgacggagctg
ggtcgcattgccagccactactactgcaccagtgagtccatggccacatacaaccagctg
ctgaagcccacgctgagcgagatagagctgttcagggtgttctccctgtcctcagagttc
aagtacatcactgtcagggaggaagagaaactggaactgctgaaactgctggagagagtg
ccaatacctatcaaggagagcattgaggagcccagcgctaaggtgaacgtgctgctgcag
gcatacatctcccagctgaagctggagggctttgccctgatggtggacatggtgtttatc
acacagtcagcagggcgcctcgtgcgcgccctctttgagattgtgctgtaccggggctgg
gcccagctggccgacaaggccctcgccctctgcaagatggtcaacaagcgcatgtggcag
tccatgtctcccctgaggcagttccgtcgaatcccagaggaggtggtgcgcaagattgag
aagaagaacttcccctttgagcgcctgtacgacctgaaccacaacgagattggagagctg
atccgcacacccaagatgggcaagacgatccacaagtacgtgcaccagttccccaagctg
gagctgtcagtgcatgtgcagcccatcacccggtccacactgcgtgtggagctcaccgtc
acccctgacttccagtgggaggagaaggtccacgggaactctgaggcgttctggattctg
gtggaggacgtggacagtgaggtggttctgcaccatgagtacttcctgctcaagagcaaa
tttgccaaggacgagcacacagtgaagttctttgtgccagtgtttgaacctctgcccccc
cagtacttcatccgagtggtctctgacacctggattggttcagagacccagctgcccgtg
tcattccgccacctgatcctgccggagcgctaccctccccccacagagctgctggaccta
cagcccctgccggtgtctgccctgagaaaccctgcctatgaggcactctacagcgagcac
ttccctttcttcaaccccatccagacacaggtgttcaactcggtgtacaacagtgatgac
aacgtcttcctgggggcccccacaggcagtgggaaaaccatctgcgccgagtttgccatc
ctgcgtatgttcacacagaacgcggacggtcgctgtgtgtacatcgctccactggatgcc
ttggctcagcaggtgtacaccgagatgcacaacaagtttgccggacagcttggaaagaag
gttgttctgctgactggagagaccggcactgacctcaaactgctggccaagggcaacatt
gtgatcagcacaccggagaagtgggacgtgctgtcacgccgatggaagcagaggaagaac
gtgcagaatgtgtccctcttcatcattgacgagctccacctcattgggggcgaagtcggg
cctgtgttggaggtgatctgctcacgcatgcgctacatctcctcccaactggagcgcaac
atccgcatcgtggcgctgtcctcgtccctgtccaacgcgcgggatgtggcgcagtggctg
ggctgcggcacgaccgccttcttcaacttccaccccaacgtcaggcccgtgcctctggag
cttcacatccagggcttcaacatttcccacaatgcatcacgcatcatcgccatgggcaaa
ccagcctaccaggccgtcatgcgacactcaccccgcaaaccagtggtcctgtttgttccg
tcgcggaagcagacgcgcatcactgccatcgacgtgctgacgtacgcagcagcagagctg
cagggagcaacagacgacaaggttcagagccgtttcctgcacgtcacggaggatgacctg
acccccttcctagacaagatctctgacatgacgctgaaggagacactggccagtggggtg
ggttacctgcatgaggggctgtcggagagcgagcgcaccattgtggaacagctcttcaac
tcaggggctgtgcaggtcattgtggccacccgtggcctggcctggggaatggccgctgct
gcccacctggttatcgtcatggacacgcagtactacgatggcaaaacgcactcgtatgaa
gactaccctgtgactgacgtgctgcagatgataggacgagctaacagacctctgcatgac
caagagggcaaagcggtgatcatgtgccagagttccaagaaagaattcttcaagaaattc
ctgttcgagcccctgcctgttgagagtcacctggaccactgcctgcatgaccacttcagc
gcagagattgtcaccaagaccatcgagaacaagcaggatgctgtcgactacctcacctgg
accttcctctaccgccgcatgacccagaaccccaactactacaacctgcaaggtgtttcc
catcgacacctgtctgaccacctgtcggaactggtggagaacaccatcaatgacctggaa
cagtccaagtgtatcagtgttgaggatgacatggatgtggcccctctcaacctgggcatg
atcgctgcctactactacatcaactacaccaccatcgagttgttcagcatgtcactcaac
aacaaaacgaaaatcaagggactgctggagattgtggccaacgcggcagagtacaaagac
ttgcccatcaggcatggggagacggacattctcagacagctggcaggcaggctgctgaac
aagcaggcggcccccaagttcaacgacccgcacaccaagaccaacctgctgctgcaggca
cacctgtcccgcatgcagctgtctgcagaactccagtctgacactgaggagatcctcagc
aaggcgatccggctgatccaggcgtgtgtggacgtgctgagctccaacgggtggttgagc
ccggccctggcggccatggagctggcccagatgaccacgcaggccctgtggaacaaggac
tcctacctcaagcagctgccccacttctcacaggacatcatcaagcgctgccaggaaaag
agcctggagacgatcttcgacatcatggagatggaggatgatgagcgcaacgagctgctg
cagctgacagaggcccagatggccgatgtggccaggttctgcaaccgctaccccaacatc
gagctcacctatgaggtgcaggagaaggaaaacatccgcagtgggtccacagtgaacgtg
gtggtgaccctggagagagaggatgaggtgacaggccctgtcatcgcccccttcttccca
cagaaacgcgaggaagggtggtgggtggtgattggtgactccaagaacaactccctgctg
tcgatcaagcgtctgacgctgcagcagaaagccaaggtgaagctggactttctggccccc
tcggtgggccgccacacctacaccgtctacttcatgagcgactcctacatgggctgtgac
caggagtacaagattaacattgacgtcaaggaaggtggggagagctccgacgagtctggc
agtgaaagcaactga
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