Babylonia areolata (ivory shell): 143294677
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Entry
143294677 CDS
T11321
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex exonuclease RRP44-like
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143294677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barl03019
]
143294677
Messenger RNA biogenesis [BR:
barl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
143294677
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
Rrp44_S1
CSD2
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
143294677
NCBI-ProteinID:
XP_076462182
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All DBs
Position
20:complement(47836753..47877440)
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AA seq
949 aa
AA seq
DB search
MLTSKVFIKKTKRGSVMKIVREHYLRDDVTCGSLACGSCEHPKNEKPPLVEAPESRSSLC
KKRHYLLPDTNVVLHQIDVIEDPSVTNVIILQTVLDEVRHRSLPAFKRLKDMVVNPDKHF
YVFSNEFNKDTYVEREPGESANDRNDRAIRTAAEWYMQHLCKPGVVLLTNDSENKDKAVD
AGLLAYTVSDYVRSLKDAGSLIDRLTNPLSKIAVQGNKVLYPEHLPLSAIQMGIKSGRYK
QGGFLASRENYLEANISVEGMDKMVFVQGMINLNRAVDGDTVAIEMLPKSEWSCPSSLVL
VDREEQQKEEDDIDENEKEMKNTVPEELRQPTGRVVGIIKRKWRQYCGILQPSILKEATR
HLFLAAEKKIPKIRIETRQAANLTGKRIIVAIDSWPRTSRYPLGHFVRELGNVGDKEAEN
EVLLLEHDVPHSNFSQAVLSCLPKLPWIITPEDEEKRTNLRHLDICSVDPPGCTDIDDAL
HCRRLDNGNLEVGVHIADVSHFIRPNTAIDKEAASRGTTVYLTDQRIDMVPELLSSNLCS
LRSNVDRFAFSVLWEMTDEAELVGEPQFMKSIIFSKASLTYAEAQMKIDDPNLNDSLTVS
LRNLNKLAKILKKRRIDAGALSLASTEVRFHVDSETHDPIDVQVKELRDTNSMVEVFMLL
ANITVAQKIKDEFPHCACLRRHPRPPPSNFEPLIKAAKSKGLQVNVSSGKELSESLDAAV
FRRTRSSNTMLRIMTTRCMMQAVYFCSGMLPEEEFAHYGLAAPIYTHYTSPIRRYSDIIV
HRLLAAAINADVSYPELMDKHKTQMVCNNLNYRHKMAQYAGRASVNLHTQLFFKKRVQDE
EGYVLFVRKNALQILIPKYGLEGTLFLNAPDKGSASLFTYDEEENTQTVGDVVFHVFDRV
VVQLSIDRSNVQHMKLLVNLVTPKVPGFSVPPAKEGQTTEQPPAKMRKK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgtcgaaagtgttcatcaagaaaacaaaacgagggagtgttatgaagatcgtc
cgagaacactacctacgagacgatgttacgtgtggttctctagcatgtggttcatgcgaa
catcctaaaaatgagaaaccacctttggttgaagctcctgaaagtcgcagtagtttgtgt
aaaaaacggcattaccttttgccggataccaacgttgttctgcatcagattgatgtcatt
gaggatccatctgtgacaaatgtaataattctgcaaacagtccttgatgaggtgagacac
agaagtttgcctgcattcaaacgcctgaaggatatggtggtcaacccggacaagcacttt
tatgttttctccaatgaattcaacaaagacacgtatgtggagagagagccaggagagtcg
gccaatgaccgcaacgaccgcgcgatccgaacggcagcagagtggtacatgcagcatctc
tgtaagccgggcgtggttctcctgacaaatgattcagagaacaaggacaaggctgtggat
gctggacttctggcgtatactgtgtctgattacgtgagaagcttgaaagacgctgggtca
ctgattgacagactgaccaaccctttgtcaaagattgccgtccaggggaacaaggtgctg
tacccagaacacctgcctctgtcagcgattcagatgggcatcaaatccggccgctacaaa
cagggaggcttcctggccagccgggaaaactacctggaagcgaacatctctgttgaaggc
atggacaaaatggtgtttgtgcaaggcatgatcaacctgaaccgggcggtggatggtgac
acggtagccattgagatgctaccgaaaagcgagtggagctgtccgtcatcgctggtgctt
gtcgaccgggaggagcagcagaaggaggaggacgacatcgatgaaaatgaaaaagagatg
aagaacactgttcctgaggagctccgacagccgacaggacgtgtggtgggaatcataaag
cgtaaatggaggcagtactgtggtatccttcagccttcaatcctcaaagaggctaccaga
catctgttcctcgcagcagaaaagaagattcccaagattcgcatagagactcgccaagca
gccaacctgacagggaagcgcatcatcgtcgccattgactcgtggccacggacctccaga
tatcctctgggccactttgtgcgggagctgggcaatgtgggagataaggaggcagagaat
gaggtgctgcttctggagcacgacgtgccgcacagcaacttctcccaggccgtgctcagc
tgtctgcccaaactgccctggatcatcaccccagaggacgaggagaagcgaaccaacctg
cgtcacctggacatatgcagtgtggaccccccgggctgcacagacattgatgacgccctg
cactgcaggcgtctggacaacgggaacttggaggtgggtgtccacattgcagacgtgagt
cacttcatccgccccaacactgccattgacaaggaggcggccagcagaggtaccactgtg
tacctcaccgatcagcgcattgacatggttccagaactgctcagctccaatttgtgttcc
cttcgcagcaacgtggacaggtttgccttctctgtgctgtgggaaatgaccgatgaagca
gagctggtgggtgagccgcagttcatgaaaagcattattttctccaaggcctctctgacc
tatgccgaagcacagatgaagatcgatgaccccaacctgaacgattccctcaccgtcagt
ttgaggaacctcaacaaactggccaagattctcaagaaacgcaggattgatgctggtgcc
ttgagtttggcctccactgaagttcgattccacgttgacagcgagacgcatgaccccatt
gacgtgcaggttaaggaactgagggacaccaactcgatggtggaggtgttcatgttgctg
gccaacatcactgtggcccagaagatcaaggacgagttcccccactgcgcctgtctgcgc
cgccacccgcgccccccaccctccaactttgaacccctcatcaaggccgccaagtccaag
ggtctgcaggtcaacgtgtcatcgggcaaggagctgtcggagagcctggacgcggcggtg
ttccggagaacccgttcttccaacacgatgctgcgcatcatgaccacgcgctgcatgatg
caggccgtttacttctgcagcggcatgctgcctgaggaggagttcgcccactacgggctg
gccgcccccatctacacccactacacctcccccatcagaaggtactctgacatcatcgta
cacaggcttctggctgcagcaataaacgctgacgtctcctaccctgaactgatggacaaa
cacaaaacacagatggtgtgcaacaacctgaactaccgtcacaagatggctcagtacgct
ggacgagcctcagtcaaccttcacacacagctgttcttcaagaagcgggttcaggacgag
gagggttatgtgctgttcgtcaggaagaacgccctgcagatccttataccaaagtacggg
ttggagggaacgctcttcctgaatgctcctgacaaggggagcgccagtctcttcacctac
gatgaggaggagaacactcagacagtgggggacgtcgtgtttcatgtgtttgatcgagtc
gtcgtgcagctgtccatcgaccgctccaacgtccagcacatgaagctgttggtcaacctg
gtcacacctaaggttccaggcttcagtgtgcccccagcgaaggaaggccagaccactgaa
cagccgcctgccaagatgaggaagaagtaa
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