Babylonia areolata (ivory shell): 143300986
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Entry
143300986 CDS
T11321
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
barl Babylonia areolata (ivory shell)
Pathway
barl03022
Basal transcription factors
barl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
barl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143300986
09124 Replication and repair
03420 Nucleotide excision repair
143300986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
barl03021
]
143300986
03400 DNA repair and recombination proteins [BR:
barl03400
]
143300986
Transcription machinery [BR:
barl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
143300986
DNA repair and recombination proteins [BR:
barl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
143300986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DUF3334
Motif
Other DBs
NCBI-GeneID:
143300986
NCBI-ProteinID:
XP_076471070
LinkDB
All DBs
Position
27:complement(11150498..11215796)
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AA seq
570 aa
AA seq
DB search
MSRSSEEVLLVVKPVRHKKSEGTLYMMGERMAWMLDSKNVFSVSHLYADIKVQKISPDSK
DKVQLQVVMHDGSASTFQFANPKGRPAQQADRDAVKELLQQLLPQFKRKISSELEVKNRL
LQEDPELFQLYKDLVVSQVITADEFWASRSHKFSNSAKNDSKQNTGVSPAFLADIKPQTD
GANGLKYNLTADIIESIFKTYPMVKKKHAECVPHSLSESEFWTRFFQSHYFHRDRIAINS
KDIFSECAKKDEEEIRQEIHQKVSNPLVDLTEIKDAAAEEEFRGIMEDTRASTSVSNQSL
IRRFNHHSTMVLRACQGEPPASASSSSGENGASGRVNGQDGKAKTADRTDVDNGHAKRKC
SGGKSEDESAQKKARLHAVMEIEDLSSEKQASGVSLRLEKMERYLQGPTPAAASRYTSSE
DVLTAYHNVSMHMLGWGAHSSVAVSGPQALSVLGELSPGGALMQGTTQQQLHGIVAGDVQ
AELKNSYNALCELLRHFWSCFPATTKFLEDKVVKMRGTLERFQMSKLNPLKERLSQYHYA
IDLTGHMEEMLNSAFTKFDMWQTRRMSRKT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggtcatcagaagaagtgctgttggtggtgaagcctgtgcgacacaagaaatcg
gaaggcacactgtacatgatgggagaaagaatggcctggatgctggactccaaaaacgtc
ttcagtgtcagccatttgtatgctgatatcaaagtccaaaagatttcgccggacagcaaa
gacaaagttcagctgcaggttgtaatgcatgatgggagtgctagcacgttccagtttgcc
aacccaaaaggtcgtcctgcacagcaagctgaccgtgacgcagtgaaggaactgttacag
cagttactgccgcagttcaagcggaagatttctagtgagctggaggtgaagaacagatta
ttacaggaggaccctgagctctttcagctgtacaaagatcttgtggtgtctcaagtcatc
acagctgatgagttctgggcaagtcgatctcacaaattttccaactccgcaaagaatgac
agcaagcaaaatactggtgtgtcacctgcatttttggcggatatcaagcctcagacagat
ggtgctaatggtctcaaatacaatctgacagctgatatcattgagtctatattcaagaca
tatcccatggtgaagaagaaacacgcagagtgtgttccacacagtctgtcagagagtgag
ttctggactcggtttttccagtcccactatttccatagagaccgcatcgccattaacagc
aaggacatcttctccgagtgtgcgaagaaggatgaggaagaaatccgtcaggagattcac
cagaaagtgagcaaccccctggtggacctgacagaaatcaaggacgctgctgcagaagag
gagttccggggcatcatggaagacactcgtgccagcaccagcgtctccaaccagtccctg
atccgacgcttcaaccaccactccaccatggtgctgcgcgcctgccagggggagccacca
gcctccgcctcctccagctctggtgagaatggtgccagtggccgagtgaacggccaggat
gggaaggcaaagacggcagacaggactgatgtggacaacggccatgccaagagaaaatgc
agtggtgggaaaagtgaagacgagtccgctcagaaaaaggccagacttcatgcggtgatg
gagattgaagacctgagcagtgagaaacaggcgtcaggagtgagtcttcgtctggagaaa
atggagcgctacctgcagggtcccacgccggctgctgcctctcgctacaccagcagtgaa
gatgtgctgaccgcctaccacaacgtgtccatgcacatgctgggttggggggctcactcc
tctgtggcggtcagtggtccccaagcgctgagtgttcttggggagctgtcaccaggtggc
gccttgatgcaaggaacgacccagcaacagctgcatggtatcgtggcgggggacgtacag
gctgaactgaagaacagctacaacgccctctgtgaacttctgcgccatttctggagctgc
tttccagccaccaccaagtttctggaggacaaggtggtgaagatgcgagggaccctggag
aggtttcagatgtccaaactgaaccccctgaaagagcggctcagccagtaccactacgcc
atagatctgacaggccacatggaggaaatgctcaactctgccttcaccaagttcgacatg
tggcagacccgcagaatgtcacgcaagacgtga
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