Bartonella krasnovii OE 1-1: D1092_04395
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Entry
D1092_04395 CDS
T06421
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
barn
Bartonella krasnovii OE 1-1
Brite
KEGG Orthology (KO) [BR:
barn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
barn03032
]
D1092_04395 (topA)
03400 DNA repair and recombination proteins [BR:
barn03400
]
D1092_04395 (topA)
Enzymes [BR:
barn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D1092_04395 (topA)
DNA replication proteins [BR:
barn03032
]
Prokaryotic type
DNA Topoisomerases
D1092_04395 (topA)
DNA repair and recombination proteins [BR:
barn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D1092_04395 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEE12245
UniProt:
A0A5B9D1W4
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Position
1027624..1030185
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AA seq
853 aa
AA seq
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MNIVIVESPAKAKTINKYLGSQYKVVASFGHVRDLPAKDGSVLPDQDFSMKWDIDSAAAK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDVLHQKKVLKDKPIKRVVFNAITKKSV
LDAMNNPRDIDTSLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIICDR
ESEIEHFIKEDYWSITTELKTIRNDHFQARLTMFNQKKIGKLDIQSQEQADQIRLMLEKA
QYHTLSVEAKPTKRNPFPPFTTSTLQQAASSKLGFSASRTMQIAQKLYEGIEINGEMAGL
ITYMRTDGVQIAPEAIDTARKVIHESFGNDYVPEKPRFYSTKAKNAQEAHEAIRPTDFQR
SPNQVRNFLDSDQAKLYELIWKRAIASQMRSAEIERTTVEIEALQGDNRANLRATGSVIR
FDGFISVYTDQRDEENNEENESSRLPQINTGEALTKEKVESVQHTTEPPSRYSEASLIKK
LEELGIGRPSTYASTLATLCDRGYIIIDKRKLIPDAKGRIVTAFLENFFNRYVEYGFTAD
LEEKLDLISDGKLSWKDVLRDFWDGFNASINNIQELRIANVLDVLNVTLAPLAFPEREDG
SDVRSCPLCKNGQLSLKLGRYGAFVGCSNYPECKYTRQLGTDTEEENKAVHNEEPVMLGV
DPQTGKDISLRNGRFGPYIQLGESKEAKRAGLPKEWQAENITLDKALALLSLPREIGTHP
ETGKMVTATIGRYGPYLSHNGKSARLLHADEVFDIGINRAVTVLAEQQENKTKQSRTTSA
ALATLGEHPDGGTVTVRNGRYGPYVNWGKVNATLPKDKDPISVTLSEALELISAKASRKK
TTSKKASSKTKET
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgttatcgttgaatctccagcaaaagcaaaaacaattaataaatatcttggg
tctcaatacaaagttgtcgcatcatttggacatgttcgtgatttgcctgcaaaagatggc
tccgttttaccggatcaagatttttcgatgaaatgggatatagattctgcggctgcaaaa
cgtttaaatgaaatagcaaaagccgttaaagaagccgatagccttatcttggcaacagac
cctgatcgtgaaggagaagctatttcgtggcatattctggatgttcttcatcaaaaaaaa
gttttaaaagataaacctataaaaagagttgtctttaatgccatcacgaaaaagtctgtg
cttgatgctatgaacaatccacgtgatattgatacatcacttgtcgatgcctatcttgca
cgtcgtgctctcgattatcttgttggttttacactttcacctgttttatggcgtaaactc
cctggtgcacgctcggctggacgtgttcagtcggttgctttgcgaattatttgtgaccgt
gaatcagaaatagaacattttatcaaagaagattattggtccattacaacagagttaaaa
accatcagaaatgatcatttccaagcaagattgacaatgtttaatcaaaaaaagattggt
aaacttgatattcaatctcaagaacaagcagatcaaattcgtcttatgttggagaaggcc
caatatcacacactcagtgttgaagcaaaacctacaaaaagaaatccttttcctcccttt
acaacctctacactacaacaagcggcttcttcaaaattaggcttttcagcttctcgcacg
atgcaaattgcccaaaagctttatgaagggattgaaattaacggtgaaatggcgggactt
attacttatatgcgtaccgatggtgtgcaaatagcaccagaagccattgatacagcaaga
aaagtaattcatgaatcttttggaaatgactatgttcctgaaaaaccgcgtttttattca
acaaaggcaaaaaatgcacaagaagcccatgaagcaatccgtccaacagattttcaaagg
tcccccaaccaagtccgcaattttctcgacagtgatcaggcaaagctctatgagctgata
tggaaacgcgctattgccagccaaatgcgttctgctgaaattgaacgtacaaccgttgaa
attgaagccctgcaaggagacaaccgtgcaaatcttcgcgcaacaggctctgttattcgt
tttgacggcttcatttccgtctatacagatcaacgagacgaagaaaataatgaagaaaat
gaatcatcacgtttaccacaaataaatacaggtgaagcacttacaaaagaaaaagttgaa
tctgtacaacataccacagagcccccttcccgttattctgaagcctcattaattaaaaag
cttgaagaattgggaattggtcgtccctcaacttatgcctccacattggcaacattgtgt
gatcgtggatatattatcattgataagcggaagctaattcctgatgctaaggggcgtatt
gttacagcctttcttgaaaatttctttaatcgctatgtagaatatggtttcacagcagat
cttgaagaaaagctggatcttatctctgatggcaaactttcttggaaagacgtattgcgt
gatttttgggatggatttaatgcatctattaacaatatccaagagcttcgtatcgccaat
gtccttgatgttttaaatgtaacattagcacctctcgcctttcctgaacgcgaagatgga
agtgatgtgcgttcctgtcctctgtgtaaaaatggtcaattatccttaaaacttggtcgt
tatggtgcttttgttggctgttccaattatcctgaatgtaaatatacacgccaacttggt
acagatacagaagaagaaaataaagctgtgcacaatgaggaacctgtgatgcttggtgtt
gatcctcaaacaggaaaagatatttctcttcgcaatggccgttttggtccctatattcaa
cttggtgaaagcaaagaagccaaacgtgcgggattaccaaaagaatggcaggcggaaaat
atcactcttgataaagccttggctttactctcccttccccgtgaaattggcacgcatcct
gaaactggcaaaatggtcactgcgacaattggacgctatggtccctatcttagtcataat
ggaaaatctgcgcgccttcttcatgcggatgaagtttttgatattggtatcaatcgcgct
gttacagtattggcagaacaacaagaaaataaaaccaagcaaagcagaacaacatctgct
gcacttgcaacattaggggaacaccccgatggaggaactgtcactgtgcgcaatggacgt
tatggtccttatgtcaattggggtaaagttaatgcaacattgccaaaagataaagatccc
attagtgtaaccctttcagaggcgttagaacttatatcggctaaagcatcgcgtaaaaag
acaacgtcaaaaaaagcttcctccaaaacaaaagagacataa
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