Bartonella krasnovii OE 1-1: D1092_05355
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Entry
D1092_05355 CDS
T06421
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
barn
Bartonella krasnovii OE 1-1
Pathway
barn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
barn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1092_05355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
barn03019
]
D1092_05355
Enzymes [BR:
barn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D1092_05355
Messenger RNA biogenesis [BR:
barn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1092_05355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
QEE12418
UniProt:
A0A5B9D1R0
LinkDB
All DBs
Position
complement(1218332..1219714)
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AA seq
460 aa
AA seq
DB search
MSIKKEDVFKKLGLPILLIKNLRISGMSKPKPIQEQAIPMMLKGHDILGIAQTGSGKTLA
FALPILSRILTLGDKRSPKTARALILVPTRELAIQIDEAIRTVAKGTHISTCLIFGGVSR
LKQIKRMEAGVDVLIATPGRLRDLVREKCIDLSHSRFLVLDEADRMLDMGFIHDVKQIAK
LLHQERQTALFSATMPKEIITFAKSLLNDPVKIEVVPQGTTAVEITQKLYCVPTCEKKNV
LSKILTNPAFNSVIVFTRTKHGADTVTRHLAKIGYLVATIHGNKSQGARQSALKAFREGE
VRILVATDIAARGIDVPGISHVINYDLPDEAENYVHRIGRTGRNGASGEALTLFDEKIER
TRLRAVERLIRMKLVPESVPEQFAEFPEKPIVPKSEEKENNKERRLKKSKRQKQYLGRKD
DSAQLQCKNFSSPNERHKKAKAAAKLARAFRFRKSVKKAA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgtctataaaaaaagaagatgtttttaaaaagttaggtttacctattcttttgattaaa
aatttacgcatttctgggatgagtaaacctaagcctatacaggaacaagctattccaatg
atgttgaaaggacacgatattttagggattgcacagacaggttctggaaaaactttggca
tttgccttacctatcttaagtcgaattttaactttgggtgataaacgctctcctaaaact
gcacgtgctttgattttagtgccaacgcgtgaacttgctattcagattgatgaagcaatt
cgtactgtggcgaaagggacacatatttcgacgtgtcttatttttgggggggtatcacgt
ttaaaacaaattaagcgtatggaagcaggtgtggatgttttgattgcaactccagggcgt
ttgagagatcttgtgcgtgaaaaatgtattgatctttctcactctcgttttttggttttg
gatgaagcagatcgtatgctggatatgggatttattcatgatgttaagcaaattgcaaag
cttttgcatcaagaacgtcagacagcacttttttctgcaacaatgccaaaagaaattatt
acatttgcaaagtctttactcaatgatccggtgaagattgaagttgttcctcaaggtacc
acagctgtagagattacccagaagttatattgtgttcctacgtgtgaaaaaaagaatgtt
ttaagtaaaattttgacaaatccggcttttaattcggttattgtttttactcgaacgaaa
catggggctgatactgtcacacgtcatttagcaaagataggctatttagttgcaacaatt
catgggaataaatcacaaggtgctcgccaatccgctttaaaagcatttcgtgaaggagag
gtacggattcttgttgcaacagatattgctgcacgcggtattgatgtaccaggaataagt
cacgtgattaattatgatttaccagatgaagctgagaattatgtacatcgtatcggtcgt
actgggcgcaacggtgcatctggtgaggcacttacactttttgatgaaaagatagaaagg
actcggttgcgcgctgtagagcgcttgattcgcatgaaattagttcctgaatctgttcca
gaacaatttgcagaatttccagaaaagccgattgttcccaaaagtgaagagaaagaaaac
aataaagaacgccgtttaaaaaaatctaaacgtcagaagcagtatttaggtcgaaaagat
gattctgcacaattacagtgtaagaatttttcatctccaaatgagaggcataaaaaagca
aaagcggctgcaaagcttgcaagggcttttcgttttcgcaagtcagtcaagaaagcggct
taa
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