Bartonella krasnovii OE 1-1: D1092_05565
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Entry
D1092_05565 CDS
T06421
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
barn
Bartonella krasnovii OE 1-1
Pathway
barn03420
Nucleotide excision repair
barn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
barn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1092_05565
03430 Mismatch repair
D1092_05565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barn03400
]
D1092_05565
Enzymes [BR:
barn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1092_05565
DNA repair and recombination proteins [BR:
barn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1092_05565
MMR (mismatch excision repair)
Other MMR factors
D1092_05565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
DUF5133
DUF3553
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
QEE12456
UniProt:
A0A5B9D1M1
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All DBs
Position
1269803..1272139
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AA seq
778 aa
AA seq
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MNNFSDHIPFFEEDAPPAYDEKGSGISSHVLKKKKSYNTDYLEQLNPEQQQAVMNTEGPL
LVLAGAGTGKTRVLTTRISHILRSGLASPQQILAVTFTNKAAREMKTRIGELIGEIVEGM
PWLGTFHSTGAKILRRHAELVDLKRNFTILNSDDVLRLLKQLIQAEGLDDKRWPARNLAM
MIDSWKNQGLSPEHISKSDAHSFGNGMGRNLYYSYQNRLKDLNACDFGDLLLHSISIFQH
NPDILREYHSQFRYILVDEYQDTNTAQYLWLRLLAQHPQGQNVNLCCVGDDDQSIYGWRG
AKVENILRFEKDFPSSQIIRLERNYRSTSHILKAASHLIAHNEERLGKVLFSAQIKSEEE
KVKIHSAWDSAEEARAIGEEIERAQQTGHALNHMAILVRASFQMREFEDRFVTLGLNYRV
IGGPRFYERMEIRDAMAYLRVVVHPADDLAFERIINTPKRGIGDATLRSLYESARARSVS
LFSAAADIIETDELKPKARSALRNLIENFRRWQNMLQDTPHRELAEIVLEDSGYTTMWLE
DRSPEAPTRLENLKEMIRSMEQFENLQSFLEHVALVMETENNENMDAVNIMTLHSAKGLE
FETVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGLTRAKKHLHIWFVSNRRVHGLW
QSALPSRFLDELPAEHIEAIAMETSYGGYGKSSFQHNDSFYNDYVTPRKKHSQKYKNIEG
KVIAQSISHAPSNFSINDRIFHIKFGYGRITAIDDHKLTIMFEKAGEKRVLDNFVDKA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttccgatcacatacctttttttgaagaagatgcccccccagcctatgat
gaaaaaggctctgggatttcttcccatgttctaaagaaaaaaaaatcatataacacagac
tatttagaacagctcaatccagaacaacaacaagctgttatgaatactgaggggcctctt
ttagttcttgcaggtgcaggcactggaaaaacacgtgtcttaacaacccgtatttctcat
attctgcgctctggactcgcctctcctcaacaaatacttgctgtcacttttaccaacaaa
gcagcccgtgaaatgaaaacacgtattggtgaacttattggtgaaattgttgaaggaatg
ccttggcttggaacttttcattctactggtgctaaaattttacgccgtcacgcagaactt
gttgatttaaaaagaaactttacaattctcaatagcgatgatgttcttcgacttttaaaa
cagcttattcaagctgaaggattagacgacaagcgttggcccgcacgaaatctagccatg
atgattgattcttggaaaaatcaaggactttcaccagaacatatctcaaaaagtgatgct
cattcctttggcaacggcatgggacgcaacctttattacagttaccaaaatcgattaaaa
gatcttaatgcttgtgattttggcgatcttctgcttcattctatctctatcttccaacac
aatccagatattcttcgcgaatatcattctcaatttcgctatattcttgttgatgaatat
caagatacaaatacagcacaatatctttggcttcgccttttggcacaacatcctcaaggt
caaaatgttaatctttgttgtgttggtgatgatgatcaatctatttatggatggcgtggt
gcgaaagtcgagaatatattacgatttgaaaaagattttccttcttcccaaattattcgt
ctagaacgcaattatcgctcaacatctcatattcttaaagctgcctctcatctaattgct
cataatgaagaaagactgggtaaagttcttttttctgctcaaataaagagtgaggaagaa
aaagtaaaaattcattcagcatgggattcagcagaagaagcgcgagctatcggagaagaa
atcgaacgcgctcaacaaaccggtcatgcattgaatcatatggctattttggtacgcgca
tcatttcaaatgcgtgaatttgaagatcgctttgtaacgcttggccttaactatcgcgtc
attggtggtcctcgtttttatgaacgaatggaaatacgtgatgccatggcttatttacgc
gttgttgttcatcccgctgatgatttagcctttgagcgtattatcaatacacctaaacgc
ggcataggcgatgcaaccttgcgcagtctttatgagagtgcacgcgcacgttctgtttct
ctcttttctgcggctgctgacatcattgaaacagacgagctaaaacctaaggcacgcagt
gctttacgaaaccttattgaaaacttccgccgctggcaaaatatgctgcaagacaccccc
cacagagaacttgccgagatcgtccttgaagattctggttatacaaccatgtggttagaa
gatcgctcaccagaagcgcccacacgactagagaatcttaaggaaatgatccgttccatg
gaacagtttgaaaatcttcaaagctttttagaacatgttgcactggtaatggaaacggaa
aataatgaaaacatggatgccgtcaacatcatgacactccattccgctaaagggcttgaa
tttgaaacagtttttcttccaggttgggaagaagggctctttccccatcagcgctcatta
gatgaaggtggacgttcaggattagaagaagaacgacgtcttgcttatgtggggcttaca
agagcaaaaaaacatttacatatatggtttgtatccaaccgaagagttcatggactttgg
caatctgctcttccctcccgttttctagatgaactaccagcagaacatatagaagccata
gccatggaaacatcttatggtggttatgggaaatcctcctttcagcataatgattccttt
tataatgactatgtaacaccaagaaaaaagcattcacaaaaatacaaaaatattgaagga
aaagttatcgctcaatcaatctctcacgcaccatcaaatttttctatcaatgatcgaatt
tttcacataaaatttggttatggtcgtattacagcgatagatgatcataaattgacaata
atgtttgaaaaagctggagaaaagcgtgtactggataattttgtagacaaagcttaa
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