Bartonella krasnovii OE 1-1: D1092_05770
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Entry
D1092_05770 CDS
T06421
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
barn
Bartonella krasnovii OE 1-1
Brite
KEGG Orthology (KO) [BR:
barn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D1092_05770 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
barn03021
]
D1092_05770 (rpoD)
Transcription machinery [BR:
barn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D1092_05770 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QEE12495
UniProt:
A0A5B9D2R4
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All DBs
Position
complement(1319921..1321939)
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AA seq
672 aa
AA seq
DB search
MATKVKQKDNTEVTTQASLDGPLLDFSDDAIKKMIKLAKKNGYVTMDELNAVLPSDEVTS
EQIEDILAMFSEMGVNVVDDEDEVESENYEDEVTVEGGDLVEASNHALATTTNKREVTDR
TDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIWRDELKE
QRILLREIIDLETTYAGPEAKQAPVIERSEVDKIKEEKMSSAIRNMGENIGERSIEEDDD
EEDDDDVNLSLAAMENELCPQVMETLDFIAQTYVKLRKLQDQHVESSLAERKEGALTASQ
KKKYIQLKGELIQAVKSLSLNQNRIEALVEQLYDINKRLIHNEGKLKRIANSYGIGHEDF
LKEYQGRELDADWMNYIAALPAPGWKEFSMREAKEIQRLRSEIQNLAQETAISIGEFRRI
VMQVQKGERESTIAKKEMVESNLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEY
RRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPE
ELSSKLSMPLEKVRKVLKIAKEPISLETPVGDEDDSHLGDFIEDRNALLPIDAAIQANLR
DTTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHP
SRSRKLRSFLDS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggttaaacagaaagataatacagaagtaacaacccaagcgagtttggat
ggtcctcttcttgatttttctgatgatgccatcaagaaaatgattaaacttgccaaaaaa
aatggttacgtaacgatggatgaactcaatgccgttcttccttccgatgaggttacgtcc
gaacaaattgaagatatcttggcgatgttttctgagatgggggttaatgttgtcgatgat
gaggatgaagttgagtccgaaaattatgaagacgaagttacggtagaggggggagattta
gtagaggcctctaaccacgcacttgcaacgacaacgaataaacgcgaagtaacagatcgt
acggatgatccggtgcgtatgtatttacgtgagatgggagctgttgagcttctgtcacgg
gaaggcgaaattgccattgctaagcgtattgaggcagggcgtgagacaatgattgcggga
ctttgtgagagccctttgacttttcaggccctgattatctggcgtgatgagttaaaagaa
cagcgcattcttcttcgtgaaattattgatcttgaaacgacttatgctggtccagaagca
aagcaggctcctgttattgagcgaagtgaagttgataagataaaagaagaaaagatgtct
tctgctatacgtaatatgggggaaaatataggagaaagaagcattgaagaagatgatgat
gaagaagacgatgatgatgttaacttatcccttgcagcaatggaaaatgaactttgtcct
caagttatggaaacattggactttattgctcaaacctatgtaaaattacgcaaattacaa
gatcagcatgttgaaagcagtttggcagagcgtaaagagggggctcttacagcttctcaa
aagaaaaaatatattcaactaaagggtgagttgattcaagctgtaaagtctctctctttg
aaccaaaatcgtatcgaagctttggttgaacagctttatgacatcaataagagattgatt
cataatgaaggtaagttgaaacgaattgcaaacagttatggcattggtcatgaagatttt
ttaaaggaatatcaaggacgtgaattggatgcggattggatgaattatattgccgctttg
cctgcaccgggttggaaagaattttcaatgcgtgaagcaaaagaaattcaaagactgcgg
agtgaaatacaaaacctcgcgcaagaaacggctatttctattggtgaatttcgccggatt
gtgatgcaggtgcagaaaggtgaacgcgaatcaaccattgcgaaaaaagagatggtcgaa
tctaatttacgtcttgtcatttcaattgcaaaaaaatacacgaatcgtggtttgcagttt
cttgaccttattcaagagggaaatatcggtttgatgaaggctgtggataagtttgaatat
cggcgcggctacaaattttcaacttatgccacatggtggattcgtcaagccattacacgc
tcgattgcagatcaggcacgcactattcgtatccctgttcatatgattgaaacaattaat
aaaatcgttcgtacttcacgtcagattctccatgaaattgggcgagagccaacaccagaa
gaattatctagcaagctttctatgccattagaaaaagtgagaaaggttcttaaaattgca
aaggaacctatttcactcgaaacacctgttggtgatgaagatgattctcatttgggtgat
tttattgaggataggaatgcgttattacccattgatgctgctattcaagcgaacttacgc
gatacgacaacacgcgttcttgcttcattaacaccacgtgaagaacgtgttttgcggatg
cgttttgggatagggatgaatacagatcacacactagaagaagtaggacaacagttctca
gttacaagagaacgcattcgtcagattgaagcaaaggcacttcgtaaattgaagcatcct
agccgttcacgaaaattacgcagttttctcgattcttaa
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