Bartonella sp. 1-1C: B11Cv2_000220
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Entry
B11Cv2_000220 CDS
T05463
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
baro
Bartonella sp. 1-1C
Pathway
baro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B11Cv2_000220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baro03019
]
B11Cv2_000220
03016 Transfer RNA biogenesis [BR:
baro03016
]
B11Cv2_000220
Enzymes [BR:
baro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B11Cv2_000220
Messenger RNA biogenesis [BR:
baro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B11Cv2_000220
Transfer RNA biogenesis [BR:
baro03016
]
Prokaryotic type
tRNA degradation factors
B11Cv2_000220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ATO56811
UniProt:
E6YTJ3
LinkDB
All DBs
Position
complement(25378..27579)
Genome browser
AA seq
733 aa
AA seq
DB search
MFKTHKVEIEWAGRPLILETGKIARQADGAILATYGETVVLATVVSAKIPKPDQNFFPLT
VNYQEKNYAVGKIPGGYLKRENRPSESETLISRLIDRPIRPLFVDGYKNDTQVIVSVIQH
DLENNPDILAIIASSAALTLSGIPFMGPIAAARIGYCNGQYILNPNIDEMPESKLDLVVA
GTENAVLMVESEAHELPEDVMLDAVMFGQKSFQPVINAIIKLAEVAAKEPRDFIPEDLSI
LEKDMLKMIEQDLRDVYTITDKQKRHAAIDLLKEEVINKFTQETEKNCEFNTDQIATVFK
HLQAKIVRQNILDTGKRIDGRNLSDVRSIQSEVGILPRTHGSALFTRGETQALVIATLGT
GEDEQYIDSLTGMYKETFLLHYNFPPFSVGEIGRIGSPGRREIGHGKLAWRAIHPMLPTK
ESFPYTIRTVSEITESNGSSSMATVCGTSLALMDAGVPLANPVAGIAMGLIKEGEQFAVL
SDILGDEDHLGDMDFKVAGTENGITSLQMDIKIDGITEEIMKIALAQAKDGRIHILNEMA
KALARARSELSEFSPRIEMMNIPVDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTIKIA
SSDLKTIEAAKNWILSIVDEPEVGAIYQGTVVKIAEFGAFVNFFGSRDGLVHISQLAVER
VAKTTDIVKEGDKVWVKLMGFDERGKIRLSMKVVDQQTGKELIHDDSVETEKGGNIHERN
PSEKKNRRKKKED
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaacccataaggtagaaattgaatgggccggccggccacttatcctcgaaaca
ggaaaaattgcacgtcaggcagatggcgcgattcttgctacatatggtgaaactgttgtt
ttggcaactgtcgtttcagcaaaaatcccgaaaccagatcaaaatttttttccgctcacc
gttaattatcaagaaaaaaactatgcagttggtaaaatacctggaggttatttaaaacgc
gaaaaccgtccaagtgaaagtgagaccttaatttcacggttaattgatcgtccaattcgc
ccgctctttgttgatggttataaaaatgatacacaagtaatcgtttctgtcatccagcat
gatttagaaaacaaccctgatattcttgctataattgcatcttctgctgcactaactctc
tcaggtattccttttatgggcccaattgccgctgctcgtattggttactgtaatggacaa
tatattcttaatcctaatattgacgagatgcctgaatcaaaacttgatctcgttgttgct
ggaacagaaaatgctgtactaatggttgaatcagaagcacatgaattacctgaagatgta
atgttagacgctgtcatgtttggtcaaaaaagttttcaacctgtaattaatgcaatcatc
aaacttgccgaagtagctgctaaagagccccgcgactttattccggaggatctgtctatc
cttgaaaaagatatgcttaaaatgatcgaacaagatctcagagacgtttatacaattact
gataaacaaaaacgtcatgctgcaattgatcttcttaaagaagaagtcatcaataaattc
acacaagaaacagaaaaaaactgtgaatttaatacagatcagattgcaactgttttcaaa
catttgcaagcaaaaattgtacgccaaaacatccttgatacgggaaaacgcattgatgga
cgaaatctttcagatgttcgctcaattcaatcagaagtaggtattttacctcgtacacat
ggatcagcattatttactcgtggtgaaacacaagcacttgtcatagccacattaggaact
ggagaagatgagcaatatatagattccttgacaggcatgtataaagaaacattccttctt
cattataattttccacctttttcagtaggtgaaataggtcgtattggttctccaggtcgc
cgtgaaattggtcatggtaaattagcgtggcgtgctattcatcccatgttgccgacaaaa
gaatcatttccttatactattcgtactgtatcagaaattactgaatcaaatggatcttct
tcaatggcaactgtttgtggaacttcactagcactcatggatgcaggtgttcctttagcc
aaccctgttgctggtattgcaatgggtttgattaaagaaggtgaacaatttgctgttcta
tcagatattttaggggatgaagatcaccttggtgatatggatttcaaagtagcaggtaca
gaaaacggaattacttctctgcaaatggacataaaaattgacggcattactgaagaaatt
atgaaaatcgcacttgcacaagctaaggatggtcgaatccatattctcaatgaaatggca
aaggccttagctcgtgcacgtagtgaactcagcgaattttctccacgtattgaaatgatg
aacattcctgtagataaaattcgtgatgttattggttctggtggtaaagtaataagagaa
attgtggaaaaaactggagctaaaattaatattgaggatgatggaacaattaaaattgct
tcttctgatttaaaaaccattgaagcagcaaaaaattggatcctttcgattgttgatgaa
cctgaagtcggtgctatttaccaaggaacagttgttaaaattgcagaatttggagcgttt
gttaatttttttggttctcgcgatggacttgtccatatctcccaactcgcggtagaacgg
gtagcaaaaacaactgatattgtcaaagaaggtgataaggtttgggttaaattaatgggc
ttcgatgaacgtggtaaaattcggttatcgatgaaagtcgtagatcaacaaactggaaaa
gagcttatccatgatgactcagtagaaacagaaaaaggtggtaatattcatgaaaggaat
ccatctgaaaagaaaaaccgtcgtaagaaaaaagaagattaa
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