KEGG   Bartonella sp. 1-1C: B11Cv2_004620
Entry
B11Cv2_004620     CDS       T05463                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
baro  Bartonella sp. 1-1C
Pathway
baro03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:baro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B11Cv2_004620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:baro03021]
    B11Cv2_004620
   03400 DNA repair and recombination proteins [BR:baro03400]
    B11Cv2_004620
Enzymes [BR:baro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B11Cv2_004620
Transcription machinery [BR:baro03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B11Cv2_004620
DNA repair and recombination proteins [BR:baro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B11Cv2_004620
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: ATO57237
LinkDB
Position
499499..503647
AA seq 1382 aa
MAQTLAMMSQFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMIEEPEGGRLDEGLQ
AVFKSVFPISDFSGTAMLEFVRYEFDPPKFDVEECHQRDLTYAAPLKVILRLIVFDVDED
TGSKDIKDIKEQGVYMGDMPLMTDNGTFVINGTERVIVSQMHRSPGVFFDHDKGKTHSSG
KFLFAARVIPYRGSWLDIEFDAKDIVYVRIDRRRKIPVTSLLMALGMDASDILSTFYNKV
SYERTKNGWRIPYSVDRFRGMKLVSDLVDADSGEVVAEAGKKLTVRAAKLLEEKGLKAIE
ISEDDLLGSYLAEDIVNYQTGEIYLEAGDEIDEKTLKILSDVGADQINILDIDHMNVGAY
IRNTLKVDKNESRQDALFDIYRVMRPGEPPTINTAEAMFHSLFFDPERYDLSAVGRVKMN
LRMGLDCPDTVRILRQEDILAVVKMLVELRDGRGEIDDIDNLGNRRVRSVGELMENQYRI
GLLRMERAIKERMSLVEIDTIMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITH
KRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGF
IESPYRKIIDGKVTKEVIYLSAMEESKHYVAQANSSLDAEGRFTEEFVVCRHAGEVLMAP
RDHIDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPLVGTGMEA
IVACDSGAAIGAKRGGIVDQVDAMRIVIRATEDLDPSKSGVDIYRLQKFQRSNQSTCINQ
RPLVHVGDRIEKGDIIADGSSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDV
FTSIHIEEFEVAARDTKLGPEEITRDIPNVAEEALRNLDEAGIVYIGAEVHPGDILVGKI
TPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMA
IEREEIERLAKDRDDEQSILDRSVYARLADILTGKVTIEGPKGFPKGKTLDSTVMEKYPR
YQWWQFAVEDEKLQNEIEALHKQYDESKKALQRRFMDKVEKVQRGDEMPPGVMKIVKVFV
AVKRKIQPGDKMAGRHGNKGVVSRILPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILE
THLGWACAGMGKKIGDLIKLYQETGDILPLRQRIENLIPDDDRNEPVRHYDNESLIKLAL
QMKQGVSIATPVFDGAHEADINMMLEDAGLDSSGQVTLYDGRTGEPFDRPVTVGYIYMLK
LHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVK
SDDVAGRTKVYEAVVRGDDTFEAGIPESFNVLVKEMRSLGLNVELDDARELIAQRVISDS
EG
NT seq 4149 nt   +upstreamnt  +downstreamnt
atggctcagactttagcgatgatgtcccaatttaatggccgtagacgtgtgcgtaaattt
tttggtaagattcctgaagtagcagaaatgccgaatcttattgaagttcagaaagcttca
tatgatcaatttcttatgattgaggaaccagaaggcgggcgtttagatgaaggtttgcag
gctgtttttaaatcggtgtttcctatttcggatttctccggaacagctatgcttgaattt
gttcgttacgaatttgatccacctaaatttgatgtagaagaatgtcatcaacgtgatttg
acatatgcagcaccattaaaggtgatattgcgtttaattgtctttgatgttgatgaagat
actggttcaaaagatattaaagacattaaggagcagggtgtctatatgggtgacatgcct
ttaatgaccgacaatggtacgtttgtaattaatggtacagagcgtgttattgtttcgcag
atgcatcgctctccaggtgtcttttttgatcatgataaaggaaaaactcattcatcaggt
aaatttctttttgcagctcgtgtgattccttatcgtggttcgtggcttgatattgagttt
gatgctaaagatattgtctatgttcgtattgatcggcggcgaaagattccagtgacaagt
cttttaatggcattgggtatggatgcatcagatattttgtcgacattttataataaagtt
tcttatgaacgtactaagaatgggtggcgtattccttattcagttgatcgttttaggggc
atgaaactggtttctgatcttgttgatgcagatagcggtgaggttgtagcagaagctggt
aaaaaactaacagttcgcgctgcaaagcttttagaagaaaaaggtttaaaagcgattgaa
attagtgaagatgatttgttgggatcttatcttgcagaagatatcgtaaattatcaaaca
ggtgagatttatcttgaagctggagatgaaattgatgaaaaaacattaaagattttgtct
gatgttggtgctgatcagattaatattcttgatattgatcatatgaatgttggtgcatac
attcgtaataccttaaaagtggataaaaatgaaagccggcaggatgctttatttgatatt
tatcgggtaatgcgtccaggtgaaccgccaacaattaatacagcagaggcaatgtttcat
tcattgttttttgatccagagcgttatgatctttcagccgttgggcgagttaagatgaat
ttacgtatggggcttgattgtccggatacagttcgcattttgcgccaagaagatattctt
gctgttgttaagatgttagttgaattgcgtgatggtcgtggtgagattgatgatattgat
aatcttggcaatcgtcgtgttcggtcggttggagaattgatggaaaatcaatatcggatt
ggtttacttcgtatggagcgtgcaatcaaagaacgtatgtcattggttgaaattgatact
attatgccgcaggatttgattaatgcaaagccagcagcagctgcagttcgcgaatttttt
gggtcctcacaattatcgcaatttatggatcaaaccaatccattgtcagaaattactcat
aaacgtcgtctttctgctcttggtccaggtggtttaacccgtgagcgggcaggttttgaa
gtgcgcgatgtgcatcctacgcattatggtcgtatttgtccgattgaaacaccggaaggg
ccgaatattggtctgattaattctttagcaacatttgctcgggttaataaatatggtttc
attgaaagtccatatcgcaaaattattgatggtaaggtaacgaaagaagttatttatctt
tctgctatggaagaatcaaaacattatgttgctcaggcaaactcttcattggatgcagaa
ggacgttttacggaagaatttgttgtttgtcgtcatgctggtgaagtgttaatggctccg
cgtgatcatatagatttgatggatgtttcaccaaaacagttagtttctgtggctgctgcc
cttattccatttttggaaaatgatgatgcaaatcgtgcgctgatgggatctaatatgcag
cgtcaagcagttccacttttgcgtgcagaggcacctcttgttggtacaggtatggaagca
atagttgcttgtgattcgggtgctgctattggtgcaaaacgtggtggtattgttgatcaa
gttgatgcaatgcgtattgttattcgtgcaacagaggatttagatccttcaaagtctggt
gttgatatctatcgtttgcagaaatttcagcgttccaatcagtctacctgtattaatcag
cgtcctctcgtacatgtaggagatcggatagaaaagggtgatattattgctgatggttca
tctacagatcttggtgatttagctcttgggagaaatgttcttgtggcatttatgccttgg
aatggttataattatgaggattctattttactttctgagcgcattgttgctgatgatgta
tttacttcgattcatattgaagagtttgaggttgctgcacgtgatacaaagcttgggcca
gaagaaattacccgtgatattcctaatgttgcagaagaggcattaagaaatcttgatgaa
gcaggtattgtttatattggtgctgaagttcatcctggtgatattttagttggtaaaatt
acaccaaaaggtgaaagtccaatgacgccggaagaaaagcttttacgtgcgatttttggt
gaaaaagcttcggatgttcgtgatacttctatgcgaatgcctcctggaacttttggtact
gttgtagaagttcgtgtttttaaccgccatggggtagaaaaagatgagcgtgcaatggca
attgaacgtgaagaaattgagcgtttagctaaagatcgtgatgatgagcaatcaattttg
gatcggagtgtttatgcacgtctcgcggatatattaacgggtaaagttacgatagaaggt
ccaaaaggttttcccaaaggaaagactcttgatagtacagtgatggaaaagtatccacga
tatcagtggtggcagtttgctgttgaggatgagaagcttcagaatgaaattgaagctttg
cataagcagtatgatgaatcaaaaaaagcactgcaacgtcgttttatggataaggttgaa
aaagttcaaagaggcgatgaaatgcctcctggtgttatgaagattgtgaaagtttttgtt
gcagtgaagcgcaaaattcaaccaggagataaaatggcaggacgtcacggtaataaaggc
gttgtgtcacgtattcttccagtagaagatatgccatttcttgaggatggaacgcatgcc
gatattgttttgaatcctttgggtgtgccaagtcgtatgaatgttggccaaattcttgaa
acacatcttggttgggcgtgtgcgggtatgggtaaaaaaattggtgatttaataaagctt
tatcaggaaactggagatatattgcctttgcgtcaacgtattgaaaatcttattcctgat
gatgatcgtaatgagccagttcgccactatgataatgaaagccttattaagttagcactt
cagatgaagcagggcgtttcgattgcaacacctgtttttgatggagcccatgaagctgat
attaatatgatgttggaagatgcaggcttagatagttcaggtcaagttacgctttatgat
ggtcgtactggagagccttttgatcgtccagtgactgtaggatatatatatatgcttaaa
ttgcatcaccttgttgatgataagatacatgcgcgttcaattggaccttattcacttgtt
acacagcagccgttaggaggtaaggctcaatttggtggtcaacgttttggtgagatggag
gtttgggcacttgaagcttatggtgctgcgtatactttgcaggagatgttgacggttaaa
tcagatgatgtggccggtcgaacgaaagtttatgaagctgttgttcgtggtgatgataca
tttgaagcaggtattcctgaaagctttaacgtattagttaaggaaatgcgttctcttggt
cttaatgtagagcttgatgatgcacgtgaacttattgcacaacgagtaatatctgattca
gaaggttaa

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