Bartonella sp. 1-1C: B11Cv2_004630
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Entry
B11Cv2_004630 CDS
T05463
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
baro
Bartonella sp. 1-1C
Pathway
baro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B11Cv2_004630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baro03021
]
B11Cv2_004630
03400 DNA repair and recombination proteins [BR:
baro03400
]
B11Cv2_004630
Enzymes [BR:
baro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B11Cv2_004630
Transcription machinery [BR:
baro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B11Cv2_004630
DNA repair and recombination proteins [BR:
baro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B11Cv2_004630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
ATO57238
UniProt:
E6YVZ5
LinkDB
All DBs
Position
503820..508031
Genome browser
AA seq
1403 aa
AA seq
DB search
MNHEVMNLFNPQAPVQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVVHIWFLKS
LPGRISTLLDLTLKDIERVLYFENYIVTEPGLTSLKLHQLLSEEEYMLAVDEFGEDQFSA
MIGAEAIYELLAGMELDKIANDLRMELAETTSELKQAKLIKRLKIVENFLESGNKPEWMI
MKTIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
VQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEHPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVSEKEPGEGMAFADMGELHHALE
NKIVTLHTKIKGRFKDLNKDGGVVSKLYDTTPGRLIIGELLPKNPNISFDIVNQEMTKKN
ISKMIDQVYRHCGQKETVIFCDRIMQLGFSHACRAGISFGKDDMVIPDSKSHLVAETEAL
AKEYEQQYSDGLITQSEKYNKVVDAWGKCTDRVADEMMKRIQAIEFDPKTGRKRQMNSIY
MMSHSGARGSANQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISAVDCGTMKGLTMQPIVDSGQIVASLGQRILGRT
ALLDILHPISGEVILEGGAMIEEADVAKIEEAGIQSVQIRSALTCETRLGVCAKCYGRDL
ARGTLVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYFEASYEGTIEIRNRN
VVRNSEGHLIVMGRNMAIIIKDEAGKERVVHRISYGARIFVDDGDVVKCGQRIAEWDPYT
RPVLTEVDGYIGFEDMVDGLSVTETADESTGITKRLVIDWRANPRGAELKPAIIIYTDKK
SETIAKLYKGGEARYMMSVETILSVEPGSYVKAGDVIARLPMESAKTKDITGGLPRVAEL
FEARRPKDHAIIAEISGTVRFGRGYKNKRRIIIEPHDESLEPIEYLIPKGKLFHLQEGDQ
IEKGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQK
VEITEAGDSGYIAGDHVDRIELDEINDNLIAEGKKPAVGNPILLGITKASLQTPSFISAA
SFQETTRVLTEAAVSGKIDTLQGLKENVIVGRLIPAGTGGAIAQIRRIATVRDDLIMNER
RKSSDDETTKAMLTNMTTSTVAE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgaggtcatgaatcttttcaatcctcaggcaccagtgcagacatttgactct
attcgtatttccattgcgagtcctgagaagattctgtcttggtcatatggtgaaattaaa
aagccagagactatcaactaccggacatttaagccagagcgtgatggtcttttttgtgct
cgtatatttggccctattaaagattatgaatgtttatgtggtaaatataaacgtatgaaa
tataagggtattatctgtgaaaaatgtggtgtagaagtcactctttcacgggtgcgtcgt
gagcgtatgggtcatattgagcttgcagctcccgtagttcatatttggtttcttaagtca
ttacctggtcgtatttctactcttttagatttgactttaaaagatatcgaaagagttctt
tattttgagaattatattgttacagaaccaggattgacatctcttaagttacatcagctt
ttatcagaagaagaatatatgcttgctgttgatgaatttggagaggatcaattttcagct
atgattggtgcagaggctatttatgagcttcttgcgggaatggaattggataaaattgca
aatgatttgcgtatggagttagcggaaacaacttcagaattaaaacaggcaaaactgatt
aaacggcttaagatcgttgagaattttcttgaatctggtaataaaccagagtggatgatt
atgaaaactattccagtcattccaccagatttgcgtccattggttccattagatggtggt
cgttttgctacctcagatttgaatgatctttatcgacgtgttattaaccggaacaaccgc
ttaaagcgattaattgagttgcgtgctcctggaattattatccgcaatgaaaagcgtatg
gtgcaagaagccgttgacgcgttatttgataatggtcgtcgcgggcgtgtgattactggt
gcaaataagcgtccattaaaatccctttcagatatgttaaaaggtaagcaaggacgtttc
cgtcagaatctacttgggaagcgtgttgattattcaggtcgttctgttatcgtaacaggt
cctgaattgaaattacatcaatgtggtcttccgaaaaaaatggctcttgagttatttaag
ccttttatttatgcgcgacttgatgcaaagggctattcatctactgtaaagcaggccaag
aagcttgtcgaaaaggaacatccagaagtttgggatatcttagatgaggttattcgtgaa
catcctgtgttgctgaatcgtgcgccgacgcttcaccgcttaggaattcaggcttttgaa
cctattttgattgaaggaaaagctatacaacttcatccgttagtgtgtacagcatttaac
gcagattttgacggtgatcagatggctgttcacgtccctctctctcttgaagcacagctt
gaagctcgtgttttgatgatgtcaaccaataatattcttcatccagctaatggtgcaccg
attattgttccatcacaggatatggttcttggtctttactacctttcaattgtttctgaa
aaagaaccaggtgaagggatggcttttgcagatatgggtgaattgcatcatgctctagaa
aataaaattgtaactttgcatacgaaaattaaaggtcgttttaaggatcttaataaggat
ggtggagttgtttcaaaactctatgatacaacgcctggtcgtttaattattggtgaactt
ttaccaaaaaacccgaatatttcatttgatattgttaatcaagaaatgactaaaaagaat
atttctaaaatgattgaccaagtttatagacattgtgggcaaaaagaaactgtgattttc
tgtgatcgtatcatgcagcttggcttttctcatgcttgtcgtgctggaatttcatttggt
aaagatgatatggttattcctgatagtaagtctcatttagtagcagaaacggaagccctt
gctaaggaatatgagcagcaatatagtgatggtttaattacccaaagtgagaaatataac
aaagtcgttgatgcttggggtaaatgtactgatcgtgttgccgatgagatgatgaagcgt
attcaagcaattgaatttgatcctaagacaggtcgtaaacggcagatgaattcaatttat
atgatgtcacattccggtgcgcgtggttctgctaatcagatgaggcagttggctgggatg
cgtgggttgatggcaaaaccgtcgggcgaaattattgaaacaccaattatttctaatttt
aaagaaggcttaactgttaatgaatacttcaattcaactcacggtgcacgtaaagggctt
gctgatactgcattaaagactgctaactctggttatttaacgcggcgtcttgttgatgtt
gcacaagatgctattatttcagcagttgattgtggtactatgaaaggtctgactatgcag
ccaatcgttgattcaggacaaattgttgcttctcttggtcagagaattcttggtcgtacg
gcgcttcttgatattttgcatccaatttctggtgaggttattcttgaaggtggcgcgatg
attgaagaagctgatgttgctaagattgaagaggcaggaattcagtctgttcaaatacgt
tctgctttgacctgtgaaacgcgtcttggtgtttgtgctaagtgctatggtcgtgattta
gcgcgtggaacattggttaatcagggcgaagcagttggtgttattgcagctcaatcaatt
ggtgaaccaggaactcaacttacgatgcgtactttccacttaggtggaacagcacaagtt
gttgattcatcttattttgaggcgtcttatgagggtacaatagaaattcgtaaccgcaac
gtggttaggaattctgaaggccatttgatagttatggggcgcaatatggccattattatt
aaggatgaggctggcaaagaacgtgttgtgcatcgtattagttatggagcacgcattttt
gttgatgatggtgatgttgtaaaatgcggtcaacgtatagcagaatgggacccttataca
cggccagttctgactgaagtcgatggttatataggctttgaagatatggttgatggttta
tcagttactgaaacggctgatgaatccacaggtattactaagcgtttggttattgattgg
cgtgctaacccacgtggtgctgaactaaaaccagcgattatcatttatacagataagaag
agtgagactattgctaaattgtataaaggtggagaggcgcgttatatgatgtcagtagag
acaattctttctgttgagccgggttcttatgttaaggcaggcgatgttattgcgcgtttg
ccaatggaaagcgctaaaactaaggatattacgggtggtttgccgcgcgtagctgagctt
tttgaagcacgtcgtccaaaagatcatgctattattgctgaaattagtggtacagttcga
tttggtcgtggttataaaaataaacgccgtattattattgaaccacatgatgaatccctt
gaaccaatagaatatttaattccaaagggcaaattatttcatttgcaagagggtgatcag
attgagaaaggtgattatatccttgatggaaatccagcacctcatgatattttggcaatt
aaaggtgttgaagctttggcatcttatcttgttaatgagattcaggaagtttaccgttta
cagggtgttttgattaacgataagcacattgaagtgattgttcgccagatgttgcaaaaa
gttgaaattactgaagctggtgattctggttatattgcaggtgatcatgttgatcgtatt
gaattagatgaaatcaatgataatctaattgcagaaggtaaaaaacctgcagtgggtaat
cctatacttcttggaattacaaaagcatctcttcagacaccctcttttatttcagcagct
tcatttcaggagacaactcgtgtgcttactgaagcggcagtttctggaaaaattgatact
ctgcaagggcttaaagaaaatgttattgttggtaggcttatacctgcaggtacaggtggt
gcgattgcccaaattcgtcgtattgctactgttcgtgatgatttgattatgaatgagcgc
cgaaaatccagtgatgatgaaaccacgaaagctatgttaacaaatatgacaactagcact
gttgcagaatga
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integrated database retrieval system
